Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3810 ATGCATGCCCATGCGGGTTTCTTGGTTTCTCTTGCTTATATATCTGCTGTGTTGAATGGGCTTCATGCAGCGGGCAAGGACGCAGAGTCATTGCTCTTGGGCTGTGGCTTGGGTGACAGCGGTGGTAAAGATGCAGATGGAAGACAATGGGGGCCTGATACCAAGTACTTGTCAAGAGCTGATTCCGCCACATTCAGAGCCTCGTACCAAGACCCTTCTATTTTGTCCGAGGTTCCATACATGTGGGCTCGAATCTTCAAATCCGAGGCAACATATAAATTCCCGGTACAACCTGACAAGCGCTATTGGCTTAGGCTCCACTTTTATCCCTCTGTTTACGGTAGCTTCAATTCGGCCAGTTCATATTTCTCTGTTACGGCAAATGGGATTACGTTGTTGAGTAATTTCAGCGCCTCCATTACTTGTCAGGCCCTGTCACAAGCTTACATTGACAGAGAGTACTCCCTTGCACCTTTGAATTCAAATACTCTCACGGTTACCTTTAAGCCTTCGGACAAGTACGATGGAGCTTTCGCTTTTGTCAATGGTATAGAGCTGATCCCGACGCCGGATTTGTTCGACTCCGTCTCAGTGGTTGGGTATTCTGATCAAAGCATCGAGGCCAATAGCTACAATCTACAAACAATGTTTAGACTAAATGTTGGTGGGCAGTATATATCTCCAACCCAAGACTCTGGTTTGAGCAGGATATGGTACGATGACACACCTTATCTATATGGTGCAGCATTTGGTGTCACCAACGAAGCTCCCAAGGATGTCCCTATAAACTACCAATCCATGCCAAAATATATTGCTCCTCCTAATGTCTACTCCACATCGAGATCAATGGGCAGCGATGAGAATGTTAATATGAGGTATAACCTCACATGGATTTTCCAAGTTGATCCAAGTTTCATGTACCTTGTGAGGTTTCATTTCTGTGACTACTACAGTGACAAAATCAACCAGGTAGTGTTCAATATCTACGTGAACAATCAAACGGCCCTGCCTCAAGCAGATGTGATTGGGTGGACAGGAGGTAAAGGCGTGCCAACCTACAAGGACTCCGTGATAGTTGCCCCAGACGGGCAGGTGGGTGAGCAGCTTTGGATTGCTCTACATCCAACATCTGAGGCAAAGCCCGAATATTATGATGCAATCCTTAATGGGGTAGAGATATTCAAGCTAAATGATTCAAACTTAGCTGGCCCCAATCCTCAGCCTTCAGATATGCTGGTCAACGATGAGGAGCAGTCAAGAAGTTTTGAAACCCCCAAAGGTCCATATAATAAGACCGTCGTTATTAGTGGTGCTGCCGGAGGAGCCGCGGGAGTTGCCCTAGTGGCTGCAATATGCATTGTTTACTACCAAAAGAAGAAGAGTTTTCCAGGATCTGAGTCCCACACATCCTGGCTACCATTCTATGGTCAATCCCAAACCACTGGCAGCAAATCCACCATCTCTGGGAAGAGCACTGCTAATAGCAACATATCGGCCATGGCTCAAGGTCTTTGCCGCTATTTTTCCTTACAAGAGATCAAGCAAGCAACAAAGAATTTTGACGAGTCTAATGTTATTGGGGTTGGAGGATTTGGGAAGGTCTATAAGGGTGTTATTGATAATGGGTTTAAAGTGGCTATTAAAAGGTCCAATCCTCAATCCGAGCAAGGAGTTAATGAATTCCAGACTGAGATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAGAATAACGAGATGTGCCTGGTTTATGACTACATGGCTCGTGGCACCCTAAGGGAACATCTTTACAAGGGCAATAAACCTATGGCAACTCTATCATGGAAGCAAAGGTTGGAGATCTGCATCGGAGCTGTAAGAGGGCTTCACTACCTTCACACGGGGGCCAAGTATACCATTATTCATAGAGATGTCAAGTCAACTAACATTCTACTGGACGAAAACTGGGTTGCCAAGGTTTCAGATTTCGGCTTGTCAAAAACTGGTCCAAACATGAACAGTGATGGGCATGTTAGTACAGTAGTAAAGGGTAGCTTTGGCTACTTGGATCCTGAATATTTTAGGAGGCAACAGTTGACAGAAAAGTCTGATGTCTATTCATTTGGGGTTGTCTTGTTTGAGGCCCTGTGTGCGAGGCCTGTTCTGAATCCTAGCCTTCCAAAGGAACAGGTCAGTCTTGCAGATTGGGCTCTGGCCTGCAAAAGAAAAGGAAATCTGCAGGATATTATTGACCCCAATCTCAAAGGAAAGATCAACCCAGAAAGCTTGAAGAAGTTTGCAGACTCGGCTGAAAAGTGTTTGAGTGATCACGGACTTGATCGCCCCTCTATGAATGATCTGTTGTGGAATCTGGAATTTGCCCTCAACCTGCAAGAAAACCCAGAGGGTTCAAGCCAATCTTCACGGATAGACGAAAGTGAATTGGAAGATGGAAGCTTGAGAAATAACGACACGTCAATTGAGAATGAGATGAACCAGGAGTGTGGTGAGAATTCCACCGCCATCTTCTCACAAATTGTCAACCCAAAAGGGCGATGA 2565 0.4542 MHAHAGFLVSLAYISAVLNGLHAAGKDAESLLLGCGLGDSGGKDADGRQWGPDTKYLSRADSATFRASYQDPSILSEVPYMWARIFKSEATYKFPVQPDKRYWLRLHFYPSVYGSFNSASSYFSVTANGITLLSNFSASITCQALSQAYIDREYSLAPLNSNTLTVTFKPSDKYDGAFAFVNGIELIPTPDLFDSVSVVGYSDQSIEANSYNLQTMFRLNVGGQYISPTQDSGLSRIWYDDTPYLYGAAFGVTNEAPKDVPINYQSMPKYIAPPNVYSTSRSMGSDENVNMRYNLTWIFQVDPSFMYLVRFHFCDYYSDKINQVVFNIYVNNQTALPQADVIGWTGGKGVPTYKDSVIVAPDGQVGEQLWIALHPTSEAKPEYYDAILNGVEIFKLNDSNLAGPNPQPSDMLVNDEEQSRSFETPKGPYNKTVVISGAAGGAAGVALVAAICIVYYQKKKSFPGSESHTSWLPFYGQSQTTGSKSTISGKSTANSNISAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENNEMCLVYDYMARGTLREHLYKGNKPMATLSWKQRLEICIGAVRGLHYLHTGAKYTIIHRDVKSTNILLDENWVAKVSDFGLSKTGPNMNSDGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEQVSLADWALACKRKGNLQDIIDPNLKGKINPESLKKFADSAEKCLSDHGLDRPSMNDLLWNLEFALNLQENPEGSSQSSRIDESELEDGSLRNNDTSIENEMNQECGENSTAIFSQIVNPKGR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3810 854 FunFam FERONIA receptor-like kinase 30 190 - -
Glsi02g3810 854 FunFam FERONIA receptor-like kinase 211 397 - -
Glsi02g3810 854 Gene3D Transferase(Phosphotransferase) domain 1 596 817 - -
Glsi02g3810 854 MobiDBLite consensus disorder prediction 802 854 - -
Glsi02g3810 854 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Glsi02g3810 854 Pfam Protein kinase domain 521 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3810 854 Gene3D - 211 397 - -
Glsi02g3810 854 Gene3D - 33 189 - -
Glsi02g3810 854 MobiDBLite consensus disorder prediction 826 848 - -
Glsi02g3810 854 FunFam receptor-like protein kinase FERONIA 483 595 - -
Glsi02g3810 854 Pfam Malectin-like domain 34 395 IPR024788 -
Glsi02g3810 854 MobiDBLite consensus disorder prediction 811 825 - -
Glsi02g3810 854 CDD STKc_IRAK 526 794 - -
Glsi02g3810 854 PANTHER OS07G0166700 PROTEIN 504 800 IPR045272 GO:0004714|GO:0006468
Glsi02g3810 854 SUPERFAMILY Protein kinase-like (PK-like) 494 796 IPR011009 -
Glsi02g3810 854 Gene3D Phosphorylase Kinase; domain 1 479 595 - -
Glsi02g3810 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Glsi02g3810 854 SMART serkin_6 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3810 854 ProSiteProfiles Protein kinase domain profile. 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3810 854 FunFam Receptor-like protein kinase FERONIA 596 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3810 Glsi-ChrGlsi02 84439685 84442249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3810 29 854 Receptor kinase-like Gene Family AT3G51550 54.868 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi02g3810 Malectin_like 1.1e-37 CL0202