Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3803 ATGACAAGCGTTAAGGCCGCAGGGCCAGAGAAGTACAACATGATTAATTTTGAAGAAACTGAGTTGCGACTCGGCTTGCCCGGTGCCTCTGCAAATGACGCAGACTCTGCCCTCAAGAGCACTTGGTGTACTGGCAAGAGGGGATTCTCCGAGACCACTGTGGATTTGAAGCTTAATCTTTCTTCCAGTAATAACCACTCCCCCTCCGGTGTGGTTGCAGACAAGGCTATAGACAACACTACTGCTACTGCTCCTCGCCCTAACGACGACCCTGCAAAGCCACCCGCAAAGACGCAAGTAGTGGGTTGGCCACCAGTTCGATCATCCAGAAAGAACATTGTGACGGTTCAAAAGAGTAACAAGGATGAAGCGGGAAACAATACGAGCAGCAGCGCAACATTCGTGAAGGTGAGCATGGACGGTGCACCCTATCTACGCAAAGTGGACTTGAAGTTGTACAAGAGTTACCAAGAACTGTCTGATGCACTTGCTAAAATGTTCAGCTCCTTCACCGTTGGGAACTATGGGTCACAAGGGGTGAAGGACTTCATGAACGAGAGCAAACTGATAGATCTTTTGAACGGCTCTGACTACGTCCCAACTTACGAAGACAAGGATGGAGACTGGATGCTCGTGGGTGACGTGCCCTGGGTAATGTTCGTGGAATCTTGCAAGCGTCTGCGCATAATGAAAGGATCCGAGGCAATTGGGCTAGCGCCAAGAGCAGTGGAAAAGTGCAAGAACAGAAGCTGA 753 0.5007 MTSVKAAGPEKYNMINFEETELRLGLPGASANDADSALKSTWCTGKRGFSETTVDLKLNLSSSNNHSPSGVVADKAIDNTTATAPRPNDDPAKPPAKTQVVGWPPVRSSRKNIVTVQKSNKDEAGNNTSSSATFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTVGNYGSQGVKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWVMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3803 250 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 237 IPR003311 GO:0005634|GO:0006355
Glsi02g3803 250 MobiDBLite consensus disorder prediction 80 103 - -
Glsi02g3803 250 Pfam AUX/IAA family 19 241 IPR033389 -
Glsi02g3803 250 FunFam Auxin-responsive protein 127 242 - -
Glsi02g3803 250 SUPERFAMILY CAD & PB1 domains 126 231 - -
Glsi02g3803 250 ProSiteProfiles PB1 domain profile. 132 232 IPR000270 GO:0005515
Glsi02g3803 250 Gene3D - 126 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3803 Glsi-ChrGlsi02 84410696 84412581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3803 119 240 B3 DNA Binding Superfamily AT4G23980 31.967 1.56e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi02g3803 AUX_IAA 2.6e-83 CL0072