Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3794 ATGGATAGAGTGTTTTCTGTGGATGGAATCTCGGATCAGTGCTGGTCGCCGCCGATACCCATCGGAAATGATGAATCCTCCAAGATGAACCGCAGTGCTTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCTTCTGTAGCCTCCGACACCTCTCACCCTTCTCCTGACAAAGACGACGACCTTGTCCTTGAGATCAAAGAGCAACCCAAACCGGATCAGCCCATGCCGCCCCTTCACAACAATGCTGCTGTATTGCCCAATGATCCTCCTCCTAACGTTCCTGTTGATTCCGAGCAGTACCAGGCTTTTCTCAAGAGCAAACTCAATCTTGCTTGCGCTGCCGTCGCCTTGACTCGGGGATCTTTAGCCAAATCTCAAGAGCCAGCCACTTTTCATGACGGTGGATCACAGACTTATAATCCTTCTCAAGTTGGATCCCCTGCTACTCTAGAAGGATCTGGGCCATCTGGAGATGATTCATCTAATATACACGAAAAGGATGCGAAAGGATCAGTTGGGATTCCTTCCTTACCTGCCATGCAAAAGAAACCTGTAGTTGCAACCAGGCCAACAACAAGTGGGTCGTCAAGAGAACAGTCTGATGATGAGGAAGCTGAAGGAGAGATTGATATGACTGATAATAGGGAACCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCGGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCACTTAACTGAGCTTGAAACACAGGTTGCTCAATTAAGAGTTGAAAATTCATCCTTGTTAAAGCGCCTTACTGATGTAAGCCAGAAGTACAATGAAGCAGCTGTTGACAACAGAGTATTAAAAGCTGACGTTGAAACATTAAGAGCGAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCAATGTTTCATGGCATATCTGAGATATCATCAATGGGCATGCCATCATTTGATGGAAGCCCTTCCGAGACATCAACAGATGCAGCTGTTCCTGTGCAAGATGATTCAAATCATCACTTTTATCAGCCCACTTCTAATAATCCTATGTCTGGGCATGATCTTAGAGTCAACAATGGAATGGGGGACATTTCTTCATTTGAAAATGTGCACCAGAGCACTGCAACAATGGTAGCTGGGAACAAGATGGGGCGAACAGCTTCCTTGCAGCGGGTGGCCAGCTTGGAACATCTTCAGAAGCGAATTTGTGGTCGTCCAGATTCATGTGGGCCTCCGACCAATGGAGAGCACTAA 1275 0.4722 MDRVFSVDGISDQCWSPPIPIGNDESSKMNRSASEWAFQRFLQEASVASDTSHPSPDKDDDLVLEIKEQPKPDQPMPPLHNNAAVLPNDPPPNVPVDSEQYQAFLKSKLNLACAAVALTRGSLAKSQEPATFHDGGSQTYNPSQVGSPATLEGSGPSGDDSSNIHEKDAKGSVGIPSLPAMQKKPVVATRPTTSGSSREQSDDEEAEGEIDMTDNREPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLTDVSQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHGISEISSMGMPSFDGSPSETSTDAAVPVQDDSNHHFYQPTSNNPMSGHDLRVNNGMGDISSFENVHQSTATMVAGNKMGRTASLQRVASLEHLQKRICGRPDSCGPPTNGEH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3794 424 CDD bZIP_plant_GBF1 223 274 IPR045314 GO:0003700|GO:0006355
Glsi02g3794 424 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Glsi02g3794 424 PANTHER BASIC LEUCINE ZIPPER 63 1 413 - -
Glsi02g3794 424 MobiDBLite consensus disorder prediction 131 160 - -
Glsi02g3794 424 FunFam BZIP transcription factor 220 271 - -
Glsi02g3794 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Glsi02g3794 424 SUPERFAMILY Leucine zipper domain 222 272 IPR046347 GO:0003700|GO:0006355
Glsi02g3794 424 MobiDBLite consensus disorder prediction 127 243 - -
Glsi02g3794 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 275 IPR004827 GO:0003700|GO:0006355
Glsi02g3794 424 Coils Coil 280 300 - -
Glsi02g3794 424 MobiDBLite consensus disorder prediction 53 68 - -
Glsi02g3794 424 MobiDBLite consensus disorder prediction 212 231 - -
Glsi02g3794 424 Coils Coil 231 265 - -
Glsi02g3794 424 MobiDBLite consensus disorder prediction 45 97 - -
Glsi02g3794 424 Pfam Basic leucine-zipper C terminal 289 413 IPR020983 -
Glsi02g3794 424 Gene3D - 221 278 - -
Glsi02g3794 424 Pfam bZIP transcription factor 220 273 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3794 Glsi-ChrGlsi02 84358150 84365112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3794 1 313 bZIP Transcription Factor Family AT4G02640 41.493 2.19e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi02g3794 bZIP_C 3.2e-47 No_clan