Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3787 ATGACCCAACCTTTATCCCCCCTGGATCATGCCATGGGTCTCCACTCTCTCCACCTCATTTTCTACTACAACCACAATTTGTTTGGGTCGTTTGAGTTGGACCCCTTGAGGGAGTCCCTCTCCGAGGTTCTTTCCCTCTACCCCATGATCACTGGTCGCTTGGTCCAAGGGAGCCATGGCAACTGGGAAATCAGGTACAATGATGCGGGTGTTCGAGTTATAAAAGCCACGGTGGATACCACCCTCGATGACTGGCTCACATCAGCTAATGGATCCCAAGAGACACATCTGACGGCTTGGGACAATATGCCTGATGATCCCCACACATGGTCACCCTTTCGAATACAGATAAACGAATTCCAAGGAGGCGGCGTTGCAATAGGACTAAGCTCCACCCACCTGCTTGCCGATGTAACTTGCGCAACCTCATTCTTCAGATCTTGGACGGAGGTTCACCGCCACCTCCCCATTACTCATCCTCCTTTCTCCACTCCAACTTCACCTCCACCCACTTACACTCCTTCAAACTCACCCACGTACTTTGCTACCAAGTCTTCCACCAAACCACCTGCGCCCTCTCCCAAAATGGCCACCGCCACTTTCAAGTTCTCAACTTCGGCCATTCAGCAATGCCTCTCCAAAGTCCATCCCATCTGCCCCGATGCCACCCCATTTGACATCCTCTCCGCTCTCTTTTGGACCCGCGTTTATCGCCTGAAGCGTCCTAAAGACCACCATACTCATCACTCTCTTTCAATCTGCATCGATTTCAGGAGCCTCTTGAAACCCCCACTTCCTACTGGGTATTTCGGAAACGCCTTGTATTTTTCGTTGCTCTCCTTAAAAGTGAGAGACTTGGAGAGCAGCCGGTTAGAGCATATAGCGGGTTCGGTACATAGCCACGTGGAAGGGATTGAGGAAAGGGAAATTTGGTCGGCCATAGATTGGTTAGAATCACAGAAGGAAATTGAGGGAGGGAAGTTTAGGGCACCGACATGCATGTACGGGCCTGAGTTGATTTGTGTGTGCATGGAGCAGTCGTTAATATATGCAGCTATGTTCCACGAGGAGGAGAGGGCAGCTCATGTCTCGTGTCACGTGGGGAATGTGGAAGGTGAAGGTTTGATCATCGTGATGCCTTCGCCGGAAGGAGGGCTTGCAAGGACAGTGACGGTGATGTTGCCGGAGGATGAACTGGCTGTGTTATGCCACGACGAAGCTATATTGCAGCTACGACCAACGATGCTGCTTTGTGGGACTTCAATGTCACACTGA 1275 0.5122 MTQPLSPLDHAMGLHSLHLIFYYNHNLFGSFELDPLRESLSEVLSLYPMITGRLVQGSHGNWEIRYNDAGVRVIKATVDTTLDDWLTSANGSQETHLTAWDNMPDDPHTWSPFRIQINEFQGGGVAIGLSSTHLLADVTCATSFFRSWTEVHRHLPITHPPFSTPTSPPPTYTPSNSPTYFATKSSTKPPAPSPKMATATFKFSTSAIQQCLSKVHPICPDATPFDILSALFWTRVYRLKRPKDHHTHHSLSICIDFRSLLKPPLPTGYFGNALYFSLLSLKVRDLESSRLEHIAGSVHSHVEGIEEREIWSAIDWLESQKEIEGGKFRAPTCMYGPELICVCMEQSLIYAAMFHEEERAAHVSCHVGNVEGEGLIIVMPSPEGGLARTVTVMLPEDELAVLCHDEAILQLRPTMLLCGTSMSH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3787 424 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 380 - -
Glsi02g3787 424 Pfam Transferase family 4 405 - -
Glsi02g3787 424 Gene3D - 179 404 IPR023213 -
Glsi02g3787 424 SUPERFAMILY CoA-dependent acyltransferases 4 170 - -
Glsi02g3787 424 MobiDBLite consensus disorder prediction 159 194 - -
Glsi02g3787 424 MobiDBLite consensus disorder prediction 161 175 - -
Glsi02g3787 424 Gene3D - 1 178 IPR023213 -
Glsi02g3787 424 MobiDBLite consensus disorder prediction 176 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3787 Glsi-ChrGlsi02 84325761 84327256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3787 14 402 Monolignol Biosynthesis Gene Families AT5G48930 25.750 3.74e-26 107