Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3777 ATGAAAATTCTGATAGCTCTTGATGTGACCTGCATTAAAGATATTTATTCAAAGACGAAGAACAAAAGGATTTCGAAGGGGAAGAAAGGAGGGAAGAAGAAGGCTGCCGACCCCTTTGCTAAGAAGGATTGGTATGATATTAAGGCGCCTTCCATCTTCAACCAAAGACAGGTCGGAAAAACTTTAGTCACCCGAACCCAAGGCACTAAGATTGCATCTGAAGGACTTAAACATAGAGTCTTTGAGATCTCTCTAGCAGATCTTCAGAAGGATGAGGATCATGCCTACAGGAAAATCCGTTTAAGAGCAGAGGATGTGCAAGGAAAAAATGTTCTCACAAACTTCTGGGGGATGGACTTCACAACAGACAAGCTGAGGTCCCTCGTTCGCAAGTGGCAAACATTAATTGAGGCCCATGTAGACGTCAAGACTACTGACAACTACACGTTGAGGATGTTCTGCATTGCATTTACAAAAAGGCGTGCAAATCAGGTCAAAAGGACCTCTTATGCTCAAACAAGTCAGATTCGCCAGATTCGCCGCAAGATGAGGGAAATAATGGTAAGCCAGGCCTCTTCTTGTGATTTGAAGGAATTGGTTGTGAAGTTTATACCTGAGATGATTGGAAGGGAAATTGAAAAGGCAACCTCTAGTATATACCCACTGCAAAATGTTTTCATTAGAAAAGTCAAAATTCTGAAAGCCCCCAAATTTGATCTTGGCAAGTTGATGGAGGTTCACGGAGATTACTCGGAGGATGTTGGTTTGAAGTTAGACAGGCCAGCTGATGAAACCGTGGCGGAGGGTGAGACTGAAGTCGTCGGAGCTTAA 831 0.4332 MKILIALDVTCIKDIYSKTKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSIFNQRQVGKTLVTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTSYAQTSQIRQIRRKMREIMVSQASSCDLKELVVKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGLKLDRPADETVAEGETEVVGA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3777 276 PANTHER 40S RIBOSOMAL PROTEIN S3A 18 267 - -
Glsi02g3777 276 Pfam Ribosomal S3Ae family 31 236 IPR001593 GO:0003735|GO:0005840|GO:0006412
Glsi02g3777 276 ProSitePatterns Ribosomal protein S3Ae signature. 76 88 IPR018281 GO:0003735|GO:0005840|GO:0006412
Glsi02g3777 276 Hamap 40S ribosomal protein S1 [RPS3A]. 16 273 IPR027500 GO:0003735|GO:0005840|GO:0006412
Glsi02g3777 276 SMART Ribosomal_S3Ae_2 30 236 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3777 Glsi-ChrGlsi02 84263174 84266752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3777 20 276 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.047 4.76e-161 446