Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3770 ATGAGATGCAGCTCCTACGGTAAGTGTTCTTCAAGGTTTCCGTACTTCTCGTTGAAAATCATGGCGGACAAGGCGGTGACTATCCGAACCAGGAAGTTCATGACCAACAGGCTTCTGTCCAGAAAGCAATTCGTCATTGACGTGCTTCATCCTGGAAGACCAAATGTTTCCAAGGCTGAGCTTAAGGAGAAGCTGGCAAGAATGTATGAAGTGAAGGACCCTAACGCAATCTTTGTCTTCAAATTCCGTACCCACTTTGGAGGTGGGAAATCCACCGGTTTTGGTTTGATTTATGATTCAGTGGAGAATGCGAAGAAGTATGAGCCAAAGTACAGGCTTATTAGGAATGGACTTGATACCAAGGTAGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAACCGAGCCAAAAAGATTCGTGGAGTAAAGAAGACCAAAGCTTCTGAGGCTGCCAAGGGTGGAAAGAAGAAATAA 474 0.4473 MRCSSYGKCSSRFPYFSLKIMADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASEAAKGGKKK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3770 157 MobiDBLite consensus disorder prediction 122 157 - -
Glsi02g3770 157 Pfam Ribosomal protein S24e 45 123 IPR001976 GO:0003735|GO:0005840|GO:0006412
Glsi02g3770 157 Gene3D - 19 152 - -
Glsi02g3770 157 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 26 128 IPR012678 GO:0003735|GO:0005840|GO:0006412
Glsi02g3770 157 FunFam 40S ribosomal protein S24 21 157 - -
Glsi02g3770 157 Hamap 30S ribosomal protein S24e [rps24e]. 24 126 IPR001976 GO:0003735|GO:0005840|GO:0006412
Glsi02g3770 157 PANTHER 40S RIBOSOMAL PROTEIN S24 21 151 IPR001976 GO:0003735|GO:0005840|GO:0006412
Glsi02g3770 157 ProSitePatterns Ribosomal protein S24e signature. 86 108 IPR018098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3770 Glsi-ChrGlsi02 84179161 84181782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3770 21 152 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 88.636 3.34e-84 241