Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3767 ATGCGACCGCCACCATCCCACGCACCAGCTCACTCCAACAAACCAAACATATCCCCCCCTGACTCTGACTCTGACTCTGAGCCCACCACCCCCTCCCCTGATTCCACTCTCTCGCCCTTTTCTCTCTCTCCCATGGCCTCTGAGCAACACGACACCGTTTTCCCCGAAGAGGACGTAGACGACGACGACGACGAATCTCAAGAGGACGACGACGACGATGACGACGACGTTCTTGGTGACCCCGAGGACGATGAAGACAACGAAGCTTCTCCTTCCACCTCTTCCGCCGTCCCCGACGCCGTCACCGTTGCCGTTCCCGGTTCTGGCGTCTCCAATGGCCAAAACGCCCCAATTTCGACCACCACCGCTACCACAATTGTCGTCCCTGACTCCTCCGAACCAAAACGTGAGCGCATCGACCTGAACGAAGAGAAAAAACCTTTGGACGATTCGCGGAGACTTTTTCAACGTCTATGGACCGATGAGGACGAGATCGAGCTCTTACAGGGCTTCCTCGACTACACGACACAACGAGGATCCTCCCACCACAACGACACTGCTTTGTTCTACGACCAAATCAAGTCGAAGCTTCAGCTCGATTTTAACAAGAACCAGCTCGTCGAGAAGCTCCGACGGTTGAAGAAGAAGTACCGCAATGTTTTAAACAAGATTAGCTCTGGGAAAGAATTTTCCTTCAAGAGCCCCCACGATCAAGCCACCTTCGAAATTTCTCGCAAGATCTGGAGCAGTTTGGGTCCAATCGGCGGTGTTGTCGAGGATAATGCGTTGGACGACGACGAAATCAACCCCAACCCTAGTCCTAATTTTAGCCATTCAATGTCAAAGAATGAGATAATTATTGGGAATTCTGCGGAGAAGAGAACCTCATCGTCACGGAAGCGGTCACGATCTCGATCGGGGATGAAAACCGATGAGAAGCGCGAATTGAATGAGGGGTTGGCGTCAAACAAAGATAATTATTGTATTAATAATACTAATACTAGTAATAATCATAACAATAACCATAACATACCAGGTTTGATTGAGGAGACCGTGAGGAGTTGTTTGTCGCCGTTGTTCAAGGAGATACTGACTAGTGCGATGGGAGGCCCGTTTGGGGCAAGAGGGTTTGGAATTGGCGGATTGACATTGAATTCTATGCCGTTGAGCATCGGAGTGCCGTCCTTGATGAATTTCCGGAGCGGGGAAATGATGGACGACAAGTGGAGGAAGCAACAGATTTTGGAGTTGGAGGTGTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGGCTGCTCTGGAGGAGTTGCGATCCACCGGAGGATGA 1332 0.5098 MRPPPSHAPAHSNKPNISPPDSDSDSEPTTPSPDSTLSPFSLSPMASEQHDTVFPEEDVDDDDDESQEDDDDDDDDVLGDPEDDEDNEASPSTSSAVPDAVTVAVPGSGVSNGQNAPISTTTATTIVVPDSSEPKRERIDLNEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKEFSFKSPHDQATFEISRKIWSSLGPIGGVVEDNALDDDEINPNPSPNFSHSMSKNEIIIGNSAEKRTSSSRKRSRSRSGMKTDEKRELNEGLASNKDNYCINNTNTSNNHNNNHNIPGLIEETVRSCLSPLFKEILTSAMGGPFGARGFGIGGLTLNSMPLSIGVPSLMNFRSGEMMDDKWRKQQILELEVYSKRLELVQDQIKAALEELRSTGG 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3767 443 MobiDBLite consensus disorder prediction 268 293 - -
Glsi02g3767 443 MobiDBLite consensus disorder prediction 11 48 - -
Glsi02g3767 443 Coils Coil 417 437 - -
Glsi02g3767 443 MobiDBLite consensus disorder prediction 1 144 - -
Glsi02g3767 443 PANTHER BNAANNG10740D PROTEIN-RELATED 45 437 IPR007592 GO:0006355
Glsi02g3767 443 MobiDBLite consensus disorder prediction 261 319 - -
Glsi02g3767 443 MobiDBLite consensus disorder prediction 304 319 - -
Glsi02g3767 443 MobiDBLite consensus disorder prediction 54 89 - -
Glsi02g3767 443 Pfam Protein of unknown function, DUF573 155 249 IPR007592 GO:0006355
Glsi02g3767 443 Coils Coil 203 223 - -
Glsi02g3767 443 MobiDBLite consensus disorder prediction 107 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3767 Glsi-ChrGlsi02 84164512 84165843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3767 45 440 GeBP Transcription Factor Family AT5G28040 44.875 1.19e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi02g3767 DUF573 8.3e-35 CL0123