Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3748 ATGGGTGCACCGAAGAGAAGTGCAGTGAAGGTTTCGGAGGTGGCCGAGGAATTGGCACGCGTCCCCCTGCAGGCCATTCTCTTGGCCGATAGTTTTACTACCAAGTTCCGTCCTATAACCCTCGAACGCCCCAAAGTATTATTACCACTTGTAAATGTTCCCATGATAAATTACACATTGGCGTGGCTCGAATCTGCCGGTGTCGAAGAGGTTTTTGTTTTCTGCTGTGCTCATTCTAAGCAAGTGATTTCTTATTTGGAGAAATCTGAGTGGCTCTCCCAACCAAATTTTACAGTAACAACGATAGAGTCGCATCATTCCGTTAGCGCTGGAGATGCTTTGCGCCTAATTTATGAGCGTAACGTGATACATGGAGATTTTGTCCTTATCAGTGGAGATACTGTCAGCAACATGTCACTTACTCAGGCTCTTCAAGAGCATAAGGAAAGAAGGAAGAAAGATAGTGATGCCATAATGACCATGGTCATTAAACGATCGAAACCTAATCCAGCTACCCATCAATCTCGACTTGGTACCGATGAACTTTTCTTGGCCATTGATCCTAATACCAAGCAACTTTTGTATTATGAGGATAAGGCAGACCCTTCCAAAGGGACTCTACATCTTGACAAGTCATTGCTCCTGGATAATCCTTCCATCTCTCTGCACCATGACAAGGAGGATTGTTACATTGACATCTGCTCACCGGAAGTCCTTAGCTTATTTACTGACAATTTTGACTATCAACATTTACGGCGCCATTTTGTCAAGGGATTGCTTGTTGATGATATTATGGGATACAAGATATTTACTCATGAAATTCACTCAAACTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATACATAGATGGACATATCCATTGGTGCCTGATGTTAAGTTTTTTGGTAATTCTGCTGCTAAACTTGAACGGCAGGGAATGTATCGTGCATCAGAAATTTCGCAATCGCGTTCTGCTATTATTGGCCCATTTACTGTTATAGGATTTGGCACCAGAATTGGGGATAACACTAAAATTTCAAATTCTGTTATTGGAGAAGGATGCACAATTGGGTCAAATGTTCATATAGAGGGATCCTATATATGGGACAATGTCACCATTGAAGATGGTTGTAAGCTTAGGCATGCAATTGTGTGTGATGGGGTGACTATCAAGTCAGGAGCTGTTCTGGAACCTGGTGTAATATTGTCTTTCAAGGTTGTGATTGGGCAGGAGTTTGTTGTTCCTTCGTACTCTGAAGTATCTTTATTACAGCAGCCAGTTGAGGAAGATAGTGACGAGGAGCTGGAGTATGCTGATAGTACTGGTGCAATCGCAAGAACAGTGGATAAGTATGATGTAGAAGTTGCATCTCAAGTATTGGAGACACAATCTTGGTCTGCATCAGAGTTAGGCATGGGTGGGGCTGGTTATGTTTGGTCAAAATGTGAAGTAGGTCATGAAGAAGAATGGAGGCATTCAGTGGCTCCTATTCCTGCAAATAAAATTTCTGAGGCAATGAAAACTATGGAAGATGATCTGGAGCTTGCCAATGATGGCAGTATTCTCCCGCCTTCTGGAGAGCTGAAACCTGATTCTAATGATTCAGATGTTGATGATAATGAAGATTCCAGAGATGACTTGTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTCAGGGCTGTGCACGAAAACATAAAAGAAGACCATGTGATCTTAGAAGTCAACTCTTTGAAGTTGTCATACAATAAGATGCCGGCTGATTGTGCTGGAGCTATATTTCATGCCATGATGAAATACGCTTTAGACACCCCCCATAATTCAGCTGGTAGCTTGGTTCAGATTGTTGACGGGATACTTACAACATGGAAAAAGGTTTTAACATCCTATCTGAATGACATTGATGAGCAGATTGAAGTAATACTAAAATTTGAAGAAATGTGCTTGGAATCTGCCAAGGAGTTTGCTCCATTGTTTACAAAGATTTTGAGTATTATGTATGACAAAGATATAATACAAGAAGAGGCTATTTTAAGTTGGGAAGATGAGAAGAGAGAAGCAGACGAGTCAGATAAGCTTTTTGTGAAGCAGGCCCAGACATTTATTCAATGGTTAAGAGAGGCCCCCGAAGAAGATGATGAGGAAGAATAG 2175 0.4133 MGAPKRSAVKVSEVAEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSKQVISYLEKSEWLSQPNFTVTTIESHHSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALQEHKERRKKDSDAIMTMVIKRSKPNPATHQSRLGTDELFLAIDPNTKQLLYYEDKADPSKGTLHLDKSLLLDNPSISLHHDKEDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSNYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSAAKLERQGMYRASEISQSRSAIIGPFTVIGFGTRIGDNTKISNSVIGEGCTIGSNVHIEGSYIWDNVTIEDGCKLRHAIVCDGVTIKSGAVLEPGVILSFKVVIGQEFVVPSYSEVSLLQQPVEEDSDEELEYADSTGAIARTVDKYDVEVASQVLETQSWSASELGMGGAGYVWSKCEVGHEEEWRHSVAPIPANKISEAMKTMEDDLELANDGSILPPSGELKPDSNDSDVDDNEDSRDDLYFEKEVEATFLRAVHENIKEDHVILEVNSLKLSYNKMPADCAGAIFHAMMKYALDTPHNSAGSLVQIVDGILTTWKKVLTSYLNDIDEQIEVILKFEEMCLESAKEFAPLFTKILSIMYDKDIIQEEAILSWEDEKREADESDKLFVKQAQTFIQWLREAPEEDDEEE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3748 724 MobiDBLite consensus disorder prediction 525 552 - -
Glsi02g3748 724 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 369 IPR029044 -
Glsi02g3748 724 Gene3D - 546 724 - -
Glsi02g3748 724 SUPERFAMILY Trimeric LpxA-like enzymes 268 427 IPR011004 -
Glsi02g3748 724 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Glsi02g3748 724 Gene3D Hexapeptide repeat proteins 319 458 - -
Glsi02g3748 724 ProSiteProfiles W2 domain profile. 552 723 IPR003307 GO:0005515
Glsi02g3748 724 Pfam Nucleotidyl transferase 25 163 IPR005835 GO:0009058
Glsi02g3748 724 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 303 IPR029044 -
Glsi02g3748 724 Pfam eIF4-gamma/eIF5/eIF2-epsilon 644 723 IPR003307 GO:0005515
Glsi02g3748 724 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 9 724 - -
Glsi02g3748 724 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Glsi02g3748 724 SUPERFAMILY ARM repeat 558 716 IPR016024 -
Glsi02g3748 724 CDD W2_eIF2B_epsilon 554 716 IPR044123 GO:0005085|GO:0031369
Glsi02g3748 724 CDD LbH_eIF2B_epsilon 341 419 - -
Glsi02g3748 724 FunFam Trimeric LpxA-like enzyme 316 449 - -
Glsi02g3748 724 SMART 542_3 632 719 IPR003307 GO:0005515
Glsi02g3748 724 FunFam Translation initiation factor eIF-2B epsilon subunit 548 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3748 Glsi-ChrGlsi02 84026078 84037196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3748 1 716 Eukaryotic Initiation Factors Gene Family AT2G34970 65.698 0.0 967