Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3722 ATGGAAGTAAATACCTCTGTTGTACCTGCAGAACCACCCCTTGTTGCCACGAAGAACCAGACTTACATACAGCACCACTCACACTCAGAAAAGCATAACCATCACCACGTCCATTTACCCTCCAAAACCATTCTCATAATCATCATCACCCTCACCTCCCTTACGCTCCTTCTTTCCATTTCTCTTATTATGTTCATGCTCCGTCGGCTAAAATCCTCCACCAAGAACGGAACTTGCAAAGATAACGGTCAAGTTACTCATGACGCAAGTAGCAGATTCATCACTTCAACAACGTTGAACTTCAATTCTAGCCCAGATGTGAAGGGAGGGTGTATTTATGGAGGAAATCTGAGCAGAACAACAACGCCTAAATTCAGAGGAGTCCAAGTGTTCACATATAGGGAGCTAGAAGTGGCCACTGAAGGATTCAGTGAAGCAAATGTGGTTGGCAATGGAGGCGTTGGTTTGATGTATAGGGGAGTCCTAAGTGATGGGACTTCAGCAGCAATTAAGTTGCTGCGCAGGGAAGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGAGGTGGATCTGCTAAGCCGCTTGCACTCTCCTTATTTGGTGGAGTTAATTGGGTATTGTGCTGACCAACACCACAGGCTACTCATATTTGAATTCATGCCCAATGGTACACTCCAACACCACCTCCACTCTCCTGACGATCAGGTTCAACCGTTGGATTGGTGGACCCGCATGAGGATAGCCCTTGATTGTGCCAGGGCCCTGGAGTTCCTCCATGAACATGCTGTCACACCTGTGATCCACCGTGACTTCAAGTGCAACAATGTTCTACTGGATCATAATTTCCGTGCCAAGGTCTCTGACTTTGGATTGGCAAAGATGGGCTCAGACAAGATCAACGGTCAGGTTTCCACCCGGGTTCTGGGGACCACTGGATATCTGGCACCAGAGTACGCATCCACAGGAAAGCTTACTACAAAGTCAGATGTATACAGCTATGGTGTGGTTCTTCTGGAGTTGCTAACAGGACGTGTACCAGTTGATATTAAGAGGCCGCCCGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCAAGGTTAACCAACAGAGACAAGGTGGTGGAAATGGTTGACCCAGCTATACGAGGACAGTATTCAAAGAAGGATCTTGTTCAGGTAGCCGCTATTGCAGCAATGTGCATTCAGCCAGAAGCAGATTACAGGCCGCTTATGACAGATGTTGTACAATCACTAATACCACTTGTTAGAAACCCATCCTCTGTTAGTTCTTCTAATTCCCTAAGATTTCCGAAACATACATCGAGTCCAAGTCATTAG 1332 0.4692 MEVNTSVVPAEPPLVATKNQTYIQHHSHSEKHNHHHVHLPSKTILIIIITLTSLTLLLSISLIMFMLRRLKSSTKNGTCKDNGQVTHDASSRFITSTTLNFNSSPDVKGGCIYGGNLSRTTTPKFRGVQVFTYRELEVATEGFSEANVVGNGGVGLMYRGVLSDGTSAAIKLLRREGKQGERAFRIEVDLLSRLHSPYLVELIGYCADQHHRLLIFEFMPNGTLQHHLHSPDDQVQPLDWWTRMRIALDCARALEFLHEHAVTPVIHRDFKCNNVLLDHNFRAKVSDFGLAKMGSDKINGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNRDKVVEMVDPAIRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSVSSSNSLRFPKHTSSPSH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3722 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Glsi02g3722 443 Gene3D Phosphorylase Kinase; domain 1 113 218 - -
Glsi02g3722 443 PANTHER OS07G0668900 PROTEIN 91 427 - -
Glsi02g3722 443 MobiDBLite consensus disorder prediction 423 443 - -
Glsi02g3722 443 Gene3D Transferase(Phosphotransferase) domain 1 219 432 - -
Glsi02g3722 443 SUPERFAMILY Protein kinase-like (PK-like) 124 416 IPR011009 -
Glsi02g3722 443 CDD STKc_IRAK 149 419 - -
Glsi02g3722 443 FunFam Serine/threonine-protein kinase PBS1 111 218 - -
Glsi02g3722 443 Pfam Protein tyrosine and serine/threonine kinase 147 416 IPR001245 GO:0004672|GO:0006468
Glsi02g3722 443 FunFam Receptor-like serine/threonine-protein kinase ALE2 219 433 - -
Glsi02g3722 443 ProSiteProfiles Protein kinase domain profile. 143 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3722 Glsi-ChrGlsi02 83860800 83863244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3722 111 441 Receptor kinase-like Gene Family AT3G58690 63.905 1.66e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi02g3722 PK_Tyr_Ser-Thr 3.6e-43 CL0016