Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3704 ATGAATCTTGATCTTGAATCTTTAGCGGAGGCCACCTCAGGAGCGATAGGATCACTGTTGAGCACAACCATCTTGTATCCGCTCGATACCTGCAAGACCAAGTACCAAGCGGAGGTTCGAACCCATGGCCAGCAAAAGTACAGGAATCTCTCTGATGTGTTATGGGAAGCAATATCTACCCATCAGGTGCTTTCGCTTTATCAGGGCCTTGGAACAAAAAACCTTCAGTCCTTCATTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTCAAAAGACTGTATTTGGAAAAGAGTGGTTCTAAATCCATCGCAACAAAAGCAAACTTAGTAATTGCTGCTGCTGCTGGGGCTTGCACTGCCATTGTGACTCAGCCCCTGGATACAGCCTCTTCGAGGATGCAGACAAGTGCCTTTGGAAAGTCTAAAGGGCTCTTGAAGACCCTATCTGAAGGCACTTGGAGTGATGCATTTGACGGCCTTGGCATTTCCTTACTGCTGACCTCAAACCCTGCAATTCAGTATACAGTATTTGATCAGCTGAAACAACGAGCCCTGAATAATGGGCGAGACAAAGACAAAGGATTGTCTCCTGCGACCCTTTCTGCATTTTCGGCCTTTCTTTTAGGTGCTATTTCAAAGAGTATTGCTACCTTCTTGACATATCCTGCTATCAGGTGCAAGGTTATGATTCAAGCTGCAGAAACTGATGTAGCAGCCTCAAAAACAAACAAAAAATCACAAAAAACAGTGTTTGGAGTTCTCCATGCAATATGGAAAAGGGAGGGCATACTGGGTTTTTTCAAAGGATTGCATGCTCAGATTTTGAAGACTGTTTTAAGTTCGGCGCTGCTTTTGATGATCAAGGAAAAGATCTCAGCTTCTACTTGGGTGCTTATGCTTGCAGTTAGAAGGTACTTATTGCTCCCAAGGGGTAGAGTGAAAAACCGATAA 954 0.4413 MNLDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEVRTHGQQKYRNLSDVLWEAISTHQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGSKSIATKANLVIAAAAGACTAIVTQPLDTASSRMQTSAFGKSKGLLKTLSEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKQRALNNGRDKDKGLSPATLSAFSAFLLGAISKSIATFLTYPAIRCKVMIQAAETDVAASKTNKKSQKTVFGVLHAIWKREGILGFFKGLHAQILKTVLSSALLLMIKEKISASTWVLMLAVRRYLLLPRGRVKNR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3704 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Glsi02g3704 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 295 IPR018108 -
Glsi02g3704 317 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 316 IPR045900 GO:0005347|GO:0006635|GO:0015217
Glsi02g3704 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Glsi02g3704 317 Gene3D Mitochondrial carrier domain 4 296 IPR023395 -
Glsi02g3704 317 SUPERFAMILY Mitochondrial carrier 7 291 IPR023395 -
Glsi02g3704 317 FunFam Peroxisomal adenine nucleotide carrier 1 3 296 - -
Glsi02g3704 317 Pfam Mitochondrial carrier protein 201 292 IPR018108 -
Glsi02g3704 317 Pfam Mitochondrial carrier protein 107 185 IPR018108 -
Glsi02g3704 317 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Glsi02g3704 317 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Glsi02g3704 317 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Glsi02g3704 317 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3704 Glsi-ChrGlsi02 83760291 83762765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3704 23 310 Chloroplast and Mitochondria Gene Families AT1G25380 27.451 1.05e-13 69.3