Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3696 ATGTCTCTGGGAGAATCGGATAAACCCTACAAACGAAGTTTTCAGATAGATGAAGGATTAATGGCTCCATCGAAGAAACCTAGAAGTGTGAATAAGCGGTTTTCAAGTTTAAATGAGGTCTCTCCTGAGAAAGATGGAGTTAACTTAAATAAAACTATGCAACGGAAGAAAAAGCTTTCTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGATTTTATGAAGCATACAGGAAGTATGGGAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAATAGATCCACTGAAATGGTGGAGGCTCTTTACAGCATGAATCGGGCATACCTATCTTTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGACCACTATAATGTTTTGGGAGAGAGTGATAGTGAAAGGGAGAGTAATGATGCACCTGGATCTCGAAAACCTTTGAAACGAAAGCGTGGAAAAGATCAGTTTATTGAGCTGAAAGATTCTGTTGAGTCTCAGTCAGTTGCTTCCAATGATGGTTGCCTCTCTTTGTTGAAGAGAAGACGCTTTGATGGCAGCCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGCTTCCCCATTTCCTCTTATAAGAAAAATGATAGGGAAAATTATGTTTTGCCTAATAAAAGAAGCTTGAAGTCAGAGGTCAATGCTAATGATGATGAAGTTGCACATGTTGCAGCCTTAGCATTAACTGAGGCTGCACAACGAGGGGGTTCTCCCCAAGTTTCCCGACCACCATACAGAAGAGCAGAGAAAAAGTCCTGTCCTGTTCAGAGCTGGGAAAGACGGCATCATCAGTCTGAGACAGCTCGTGCCAAGTTATGTGATGCTCATATATATGAAGATTGCTTGGATGCTGAAAACGGAGAACATGCTAGAGATACTAGTTCCTTGATGGACATGGAAGGTGTGGGCACGGTTGAAGTTCATCATAAGGGGAAGAAAATTTACAGAAAGAGAGAGAGAGTGGAAAATGTTGGAAATAATCCGGTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGAAGGAGTTAATTTTAGTTCTTTGAGGACGAAGGTTGATAATGAGGTTTCTAATGCAAAACCTGAGCAATTCTCTCCAAAAGTTCAGAGGAAAAGAAGTAAGAAACTTTTCTTTGGAGTGACAATATCTATTCATTTTATAGATGAAAGCTCTGCCTTGGATGCCTTGCAAACTTTGGCTGATCTGTCTCTGATGATGCCTGCGTCTACAATGGAATCTGAATCATCTATCCAGTTGAAGGAAGAAACAATTGCTGTTGATGAAGATGACAAATCTTCTGTGCCTGAAGCTACATTGACAAGCCAAAGCAGAGACAAAACTAAACTCTCAGGTCCAAAACAAAAGCTTGTTCATGCAGCTCATGAAATTGAGGTTTTAACCTCCAGAAAATCTATACTTGGAAGAGAATTGGCCAATAATACTAATGCTCTCTTTGAATCGAAAGAACAGCTTCCCTCTGCTGATAGAATATGGAAAAGAAAGAGGAAGCCCATGGGTTCAAAGGTATCAAATGCAAAACTTGATTCTCAACCAAGTGATCCCTTGAATAATGAGTCTGTAGTTGATGAAGATAACAAACCAGGGATTAAAGGAAAACACACTGGTCAGACTCTGACTTTACCAAAACAATTGAAGTCTGTCAGATCGTCAGAGAGTTCCTTGTGTAGTGATCTGAAAGATTTAACAGTATCAACGGCAGAAGTTCCACCTATAAGTGAAGTTAGTTTACCAACTAAACAACGAAGTAGACGTAAAATGATTCTACAGAGAACATTCATGCCAAAAGAGAAGTCTTCTGAGAACATATTGAATAGTCAGCTTAATAAATACTCTGCCCCTCTCCAAGACAGGGCATTATATTTAAAGGACAAGCTTTCTGGTTGCATGTCATCTTATATGGTTCGTAGATGGTGTACTTTTGAATGGTTTTATAGTGCAATTGATTATCCGTGGTTTGCCAAAAGGGAGTTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAGCACTTTCTATGTGAAGAAAGACAGAAACTTAAGCAATATCGGGAATCTGTGAGGAAACATTACACTGAACTGCGGACTGATATTAGGGATGGACTTCCAACAGATTTAGCCAGACCTTTATTTGTTGGGCAACGAGTAATTGCTCTTCACCCAAAAGCAAGAGAGGTTCATGATGGGAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGACCGTCCCGAATTAGGGGTTGAATTTGTGATGGATATTGATTGCATGCCTATGCATCCCATGGATAATATTCCAGAAGCTCTGAGATGGCAGATTGGTGTTGGCAAAGTCTCTAATATGATAAAAGAGCCTCAGATGAATGGAAATTTAAATACATGTGCTTCAAGTGGACCCCTGGAAAAGTCACCCCACCCTTCATGTACTTTGGTAATTCAGGGAAAGGATGATGTTGACCGTGCCATTTCCCAATCAAAGGCTGCTACCATTGATAACACCTGTGTACAAGCAGCATATGTTCAACCTGGTATGGTGACACATCATCAAGCTAGGGAAGCTGATATAAGGGCCCTTTATGAGCTGACTTGTGCTCTAGATAAAAAGGAAAAATTGCTAATGGAGCTTAGAAATGCAAATAATGACATATTGGAAAACCAAAATGATATAGACTGCTTACAAGATTCAGAGTCTTTCAGGAAGCATTACGCCACGGTTTCTTCTGCTTTGCTTCATTTAAGGCAACGCAATACTTACACAGGAAATTCTCTGCCACTGTGGATGAAAGCCCAATCGAGTTTTAATATTCATGATGGCGTTCCTAGTACATTGTATAGTTCTCAAGCACAAGAATTAGGGTCAACTGTTATTGAAATTATCAAAGGGTCCAGGCTAAGAGCACATGCTATGGTGATTGCTGCAATTCAGGCATTGTCATCGACAAAGGAAGGTGAAGACGCATTCATGAGGATTGGGCAGGTATTGGACTCTTTTGATTATCAACAGTTGGCCTCGAACGCTAGGTTACCAGTGATCAGGTCCCAAGAGCAAGTAAATGGCAATACTAGTCACTTTAATCAGTCAATTTGCTGTGCGTCAGAGGTTTTACTTAGTGATGCATCTTGTCCAAAATTGCATAATGATTCCGACAAAGTCAATACTCAAATTCCGTCTGAGCTCATCACTTCCTGTGTTGCTACATTGATCATGATACAGACTTGTACTGAACGACAATACCCTCCTGCTGATGTGGCTCAGATATTGGACTCGGCTGTTACTAGCCTGCATCCATGCTGCCCTCAAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATCAAGACCCAGATTTTAGCTCTTATCCCAACTTGA 3522 0.4114 MSLGESDKPYKRSFQIDEGLMAPSKKPRSVNKRFSSLNEVSPEKDGVNLNKTMQRKKKLSDKLGSQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYNVLGESDSERESNDAPGSRKPLKRKRGKDQFIELKDSVESQSVASNDGCLSLLKRRRFDGSQPRAVGKRTPRFPISSYKKNDRENYVLPNKRSLKSEVNANDDEVAHVAALALTEAAQRGGSPQVSRPPYRRAEKKSCPVQSWERRHHQSETARAKLCDAHIYEDCLDAENGEHARDTSSLMDMEGVGTVEVHHKGKKIYRKRERVENVGNNPVDDGGEACSGTEEGVNFSSLRTKVDNEVSNAKPEQFSPKVQRKRSKKLFFGVTISIHFIDESSALDALQTLADLSLMMPASTMESESSIQLKEETIAVDEDDKSSVPEATLTSQSRDKTKLSGPKQKLVHAAHEIEVLTSRKSILGRELANNTNALFESKEQLPSADRIWKRKRKPMGSKVSNAKLDSQPSDPLNNESVVDEDNKPGIKGKHTGQTLTLPKQLKSVRSSESSLCSDLKDLTVSTAEVPPISEVSLPTKQRSRRKMILQRTFMPKEKSSENILNSQLNKYSAPLQDRALYLKDKLSGCMSSYMVRRWCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLKQYRESVRKHYTELRTDIRDGLPTDLARPLFVGQRVIALHPKAREVHDGSVLTVDHDKCRIQFDRPELGVEFVMDIDCMPMHPMDNIPEALRWQIGVGKVSNMIKEPQMNGNLNTCASSGPLEKSPHPSCTLVIQGKDDVDRAISQSKAATIDNTCVQAAYVQPGMVTHHQAREADIRALYELTCALDKKEKLLMELRNANNDILENQNDIDCLQDSESFRKHYATVSSALLHLRQRNTYTGNSLPLWMKAQSSFNIHDGVPSTLYSSQAQELGSTVIEIIKGSRLRAHAMVIAAIQALSSTKEGEDAFMRIGQVLDSFDYQQLASNARLPVIRSQEQVNGNTSHFNQSICCASEVLLSDASCPKLHNDSDKVNTQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3696 1173 Gene3D - 5 119 - -
Glsi02g3696 1173 FunFam Protein ALWAYS EARLY 3 isoform A 23 119 - -
Glsi02g3696 1173 SMART DIRP_2 667 768 IPR033471 -
Glsi02g3696 1173 Coils Coil 909 943 - -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 249 277 - -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 261 277 - -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 1 46 - -
Glsi02g3696 1173 Pfam Myb-like DNA-binding domain 65 101 IPR001005 -
Glsi02g3696 1173 ProSiteProfiles SANT domain profile. 62 99 IPR017884 -
Glsi02g3696 1173 PANTHER LIN-9 21 1173 IPR010561 GO:0006351|GO:0017053
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 512 559 - -
Glsi02g3696 1173 SMART sant 63 111 IPR001005 -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 443 472 - -
Glsi02g3696 1173 SUPERFAMILY Homeodomain-like 62 109 IPR009057 -
Glsi02g3696 1173 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 101 IPR017930 -
Glsi02g3696 1173 Pfam DIRP 666 767 IPR033471 -
Glsi02g3696 1173 ProSiteProfiles Myb-like domain profile. 65 105 IPR001005 -
Glsi02g3696 1173 CDD SANT 67 101 IPR001005 -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 527 542 - -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 29 46 - -
Glsi02g3696 1173 MobiDBLite consensus disorder prediction 136 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3696 Glsi-ChrGlsi02 83648130 83666278 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi02g3696 DIRP 2e-31 No_clan