Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3664 ATGACAATGGAGGGAATGATGGATAAGGCCGTACTGGATGATATCATAAGGAGGCTGCTCGAAGGCAAGGAAGGAAAACAGGTCCAGCTCTCTGAGTCGGAGATCCGTCAACTCTCCGTCAACGCCCGCCAAATCTTCCTCTCTCAGCCCGTTCTCCTCGATCTCCATGCTCCAATCCACATCGGCGGTGATATACACGGGCAGTACAAAGACTTACTGAGGCTTTTCGAATACGGTGGCTACCCTCCTGCTGCAAACTACCTGTTTCTGGGGGATTATGTAGACAGAGGAAAGCAAAGTTTAGAAACTATATGTCTGCTTTTGGCTTACAAAATAAGATATCCTGACAAAATTCATCTCTTAAGAGGAAACCACGAGGATGCAAAGATAAATAGGATATATGGTTTTTATGATGAATGTAAAAGAAGGTTCAATGTTAGGCTATGGAAGATATTTACGGACTGCTTTAACTGTTTGCCAGTAGCTGCTCTTATTAATGACAAAATACTTTGTATGCACGGGGGCCTCTCTCCAGAATTGCAAAATTTGGATCAGATAAGGGAACTTCCCAGGCCTACTGATGTTCCGGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTAACATAGAGGGCTGGGCAGATAGTGACCGAGGTGTTTCAAGTAATTTTGGTCCTGACGCAGTCACAGAGTTCTTGGATAAAAATAACCTTGATCTCATTTGCCGAGGTCATCAGGTGGTGGAGGATGGATATGAATTTTTTGCTAAACGAAGATTAGTTACGATATTTTCTGCTCCAAACTATGGTGGGGAGTTCGATAATGCTGGCGCATTGTTGAGAGTTGATGAATCTCTTGTATGTTCCTTCCGGATAATGAAACCGATTGGTAAAGGATCAGGATCTGGTTCATCAAAGTTGAATCTTACGAAGGTAGATGAGTCTGGCAAAGGGAGCCTTCCAACTTTATAA 981 0.4332 MTMEGMMDKAVLDDIIRRLLEGKEGKQVQLSESEIRQLSVNARQIFLSQPVLLDLHAPIHIGGDIHGQYKDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINDKILCMHGGLSPELQNLDQIRELPRPTDVPDNGLLCDLLWSDPDSNIEGWADSDRGVSSNFGPDAVTEFLDKNNLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLRVDESLVCSFRIMKPIGKGSGSGSSKLNLTKVDESGKGSLPTL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3664 326 MobiDBLite consensus disorder prediction 304 326 - -
Glsi02g3664 326 SUPERFAMILY Metallo-dependent phosphatases 10 299 IPR029052 -
Glsi02g3664 326 ProSitePatterns Serine/threonine specific protein phosphatases signature. 121 126 IPR006186 GO:0016787
Glsi02g3664 326 Gene3D - 5 303 IPR029052 -
Glsi02g3664 326 Pfam Calcineurin-like phosphoesterase 63 250 IPR004843 GO:0016787
Glsi02g3664 326 Pfam Serine-threonine protein phosphatase N-terminal domain 12 55 IPR031675 -
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 240 260 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 154 180 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 262 278 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 183 210 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 87 114 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 58 85 IPR006186 GO:0016787
Glsi02g3664 326 PRINTS Serine/threonine phosphatase family signature 120 144 IPR006186 GO:0016787
Glsi02g3664 326 SMART pp2a_7 30 300 IPR006186 GO:0016787
Glsi02g3664 326 FunFam Serine/threonine-protein phosphatase 3 307 - -
Glsi02g3664 326 MobiDBLite consensus disorder prediction 303 326 - -
Glsi02g3664 326 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 15 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3664 Glsi-ChrGlsi02 83378209 83380703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3664 53 243 Calmodulin-binding Proteins AT5G63870 33.186 1.68e-29 112