Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3651 ATGGAGGAGCTACATAACCAAGTCAATCCTCTGTTATTCAGTACAGGAATTACTATGCCTCGATCCAGTTTGCAGCAGTTGGACTTGTATATAAATGTGAAATACCCTAAGCCAAGCCTCCATCAGTCCATCGCCATGGCCATAAACTTGAAGCTATCAACTAGCTTATACACGTTCGTTAATGTTTCCCTTTCCATAATTCTCTTGTCTTCTCCCTCTCTTGCGGACTTCTTCTCCCCAGACACCACATGCGACCTTACACCCTATCCAGAATTCTGCAGAACCACTCTGCCTCCTTTTTATTCCGGATCCGTACATGACTATTCCCGCTTCTTCCTCCGCCAATCCTTATCTTCTACAAAAATGTTTCTTCAATTAATCTCTTCTCACCAAAGAGACTACTCCATGATTCCTGCTCCCACATTACGTGCCTTTCAAGATTGTCAAATTTTGGCTGAACTCAACTGTGACTTTCTCTCCAATACCATCCAAACCATCGGAAACACTCTAACTATCTTTCAAGCTTATGATTTGCAAACCTTGCTCAGTGCCATTTTAACCAACCAACAGACTTGCCTGGATGGCCTTCAAGAGGTAACTCCTTATCCTAGCATCACCAGTGCCTTACTGAACCCTCTCTCTGATGGGACTAAGCTTTATAGCATATCTCTCGCCCTTTTCACCAATGGTTGGCTTACCAATACCACTGTAACATCATCGAAGAATAGTAAGATAATGGAGACACCCATGAACCGAAAGTTACTGCAGAAAAACACTGACAAAGTGGAGGTGAGACAAAAAGTGGTGGTGAACCCAGATGGGTCTGGGGATTTCACCACCATCAATGATGCAGTGGCGGCCGCACCCAATAATACCGGCACCAACAACGGTTACCACGTAATTTATATCGTTGGTGGGACTTACAACGAGTATGTGTCTATTCCTAAGAACAAGCAAAATTTGATGATTGTGGGCGATGGCATTAATCAGACTATCATCACTGGCAATCGCAGTGTAGTTGATGGTTGGACCACCTTCCAATCTGCGACTTTCGGTGTGGTTGGATCAGGGTTTGTTGCAGTGAACGTCACATTTCGTAACACAGCGGGAGCCTGGAAGCACCAGGCAGTGGCTGTTCGAAGCGGGGCAGACAAGTCCACATTCTACAATTGTAGCTTTGAAGGCTACCAAGACACACTCTACGCCCATTCCCTCAGGCAGTTTTACAAGAACTGTGACATTTATGGCACAGTCGACTTCATATTTGGGAATGCAGCTGTGGTATTCCAGGACTGTAACATATACCCAAGACTTCCCATGCCAAACCAATTCAATGCCATCACAGCACAAGGCCGAACCGACCCTAACCAAAACACTGGCATCTCCATCCACAACTGTAACATCAGAGCAGCCTCTGACTTGGCTGCTGCTAATTATAGTGGCACAGACACATATCTGGGTCGGCCATGGAAGGAGTATTCAAGGACAGTTTACATGCAATCTTTCATGGATAACCTAATTGATCCCAAGGGTTGGATTGAATGGTCTGGGGATTTTGCGTTAAGCACACTGTATTATGCAGAGTACAATAACTGGGGACCAGGATCAAATATAAGCGATAGGGTCACATGGCCAGGCTACCACCTCATCAACGAAAAGGATGCCGATGATTTCACGGTATCCAAATTTATACAAGGTGACGCATGGTTGCCCCACACTGCTGTGCCTTTCAAAACTGGTTTACAATGA 1749 0.4523 MEELHNQVNPLLFSTGITMPRSSLQQLDLYINVKYPKPSLHQSIAMAINLKLSTSLYTFVNVSLSIILLSSPSLADFFSPDTTCDLTPYPEFCRTTLPPFYSGSVHDYSRFFLRQSLSSTKMFLQLISSHQRDYSMIPAPTLRAFQDCQILAELNCDFLSNTIQTIGNTLTIFQAYDLQTLLSAILTNQQTCLDGLQEVTPYPSITSALLNPLSDGTKLYSISLALFTNGWLTNTTVTSSKNSKIMETPMNRKLLQKNTDKVEVRQKVVVNPDGSGDFTTINDAVAAAPNNTGTNNGYHVIYIVGGTYNEYVSIPKNKQNLMIVGDGINQTIITGNRSVVDGWTTFQSATFGVVGSGFVAVNVTFRNTAGAWKHQAVAVRSGADKSTFYNCSFEGYQDTLYAHSLRQFYKNCDIYGTVDFIFGNAAVVFQDCNIYPRLPMPNQFNAITAQGRTDPNQNTGISIHNCNIRAASDLAAANYSGTDTYLGRPWKEYSRTVYMQSFMDNLIDPKGWIEWSGDFALSTLYYAEYNNWGPGSNISDRVTWPGYHLINEKDADDFTVSKFIQGDAWLPHTAVPFKTGLQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3651 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 229 IPR035513 -
Glsi02g3651 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 229 IPR035513 -
Glsi02g3651 582 PANTHER PECTINESTERASE 67 571 - -
Glsi02g3651 582 FunFam Pectinesterase 261 581 - -
Glsi02g3651 582 CDD PMEI-like_3 82 231 - -
Glsi02g3651 582 SUPERFAMILY Pectin lyase-like 267 579 IPR011050 -
Glsi02g3651 582 Pfam Plant invertase/pectin methylesterase inhibitor 81 226 IPR006501 GO:0004857
Glsi02g3651 582 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Glsi02g3651 582 SMART PMEI_2 73 226 IPR006501 GO:0004857
Glsi02g3651 582 Gene3D - 261 581 IPR012334 -
Glsi02g3651 582 Pfam Pectinesterase 268 567 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3651 Glsi-ChrGlsi02 83220085 83221915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3651 62 581 Carbohydrate Esterase AT4G02330 52.500 0.0 583