Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3636 ATGAAGCCGCCACTTGTTCCATTGGCAACTCTGATTGGCCGTGAGCTTCGAAATGAAAAAGTTGAAAAACCTTTTGTGAAGTATGGACAGGCTGGCTTGGCAAAGAAAGGAGAGGATTACTTTCTAATTAAGACAGACTGCCAGAGGGTTCCCGGGGATTCGTCAACACTGTTTTCTGTCTTTGCGATCTTTGACGGGCACAATGGTATATCAGCTGCTATTTTCGCAAAGGAAAATTTACTGAGTAATGTTATGAGTGCAATACCCCAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTTCCTCGAGCTCTAGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAAGGGTGAAACCTCTGGGACTACAGCAACAATTGTTCTGGTTGATGGTTGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACCCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGACCACAGATTGGAAGAGAATGCAGAAGAGAGGGAGCGCGTTACTGCTAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGACCCCTTCGCTGCTGGCCTGGTGGATTATGCCTTTCTAGATCAATCGGCGACACAGACGTAGGAGAATATATTGTGCCAATTCCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATCATAGCTTCTGACGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTAGTTAAGGAGGCTTTAAGGTCAAGGGGCTTGAAGGATGATACAACCTGCCTTGTTGTTGACATTATTCCTTCAGACCTTCCTGTATTACCACCAACTCCAAGAAAGAAACATAGTACGTTAACTTCACTTATCTTTGGAAAGAAATCTCAGAACTCTACACACAAAGCTACTAATAAGCTTTCTTCTGTGGGGGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTGCAGAAAGGCTGGGTAAGGATTTTCCGTTGAATGCAAACTCTGGGATCTTCCGCTGTGCAGTCTGCCAAGTGGATCAACCCCCTGGTGATGGTTTATCAGTGAACTCTGGGCCTTTTTTCTCTCCAGCATCTAAGCCATGGGAAGGCCCATTCCTCTGCGCAAACTGTCGAAAGAAGAAAGATGCCATGGAAGGAAAAAGGACTTGCAGACCCACAGTGACAGCTTAG 1263 0.4537 MKPPLVPLATLIGRELRNEKVEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENLLSNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQQKGETSGTTATIVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPTPRKKHSTLTSLIFGKKSQNSTHKATNKLSSVGVVEELFEEGSAMLAERLGKDFPLNANSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASKPWEGPFLCANCRKKKDAMEGKRTCRPTVTA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3636 420 ProSiteProfiles PPM-type phosphatase domain profile. 24 289 IPR001932 -
Glsi02g3636 420 PANTHER PROTEIN PHOSPHATASE 38 288 IPR015655 GO:0004722|GO:0006470
Glsi02g3636 420 FunFam probable protein phosphatase 2C 5 27 294 - -
Glsi02g3636 420 CDD PP2Cc 35 289 IPR001932 -
Glsi02g3636 420 Pfam Protein phosphatase 2C 55 272 IPR001932 -
Glsi02g3636 420 Gene3D - 25 293 IPR036457 -
Glsi02g3636 420 SMART PP2C_4 15 287 IPR001932 -
Glsi02g3636 420 SUPERFAMILY PP2C-like 30 289 IPR036457 -
Glsi02g3636 420 SMART PP2C_SIG_2 42 289 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3636 Glsi-ChrGlsi02 83109910 83112024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3636 5 419 PP2C-type Phosphatase Gene Family AT1G09160 77.831 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3636 02 83109910 83112024 Glsi02g3636 02 83109910 83112024 ECH