Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g3634 | ATGGCGCTACATGGAAGCCTTTCGCTCGCTCCAAAGCTGGCGCCATTTTTGAACCCATGGTTCGGAGCCGAAGGCTTGTGCCCTACATTGAATGATCAAGTGATGCCTTTATGCCTCAAACTCAAACAAAAGCATGTGAATGATCAAAGTTCACAAAAGCTGAATGCTCAAGTTCCTTCTTGGCCTCGCTTTCGCTTGGTTAGATCTTTAGAGGCAATTGGTGCAAGGATAAATTTTGGCCCATATGAGCGCAACCCACACACTGTGGGCCTCGAGGAATGTTTAAAGTCCATTGGGCTTAACAAGCCAATTCCATCAATGCCGGCCATAACAGAACAGATGGTAAGGGGAGGAAACGTTAGTAGCAAACGCAATTTCAGAAGAAGGGTTCCGTCAAAGGAAGGGGTTTCTGATGATTCGGATGAGGACTATGTGGTTCCGGATGAAGGTAGAGATGTGTCTGATTTTTCTGAGGATTCTTACCATTCTTTAGATGGATGTACATCAGAGGAGAGTTTTGATAATTTTGTAGAGGATGAGGAGGAGGAAATTGAAGGAATCAAGAATTTCAGGAGATCGAAGACAAAAAATGGTGTTTGTGGCCGACTTAAAATTGGCAGTAAAGCCTCACGAAAGAGGGGAAGGATGTCATATGCAGAACAACTAGATGAGGGCAAAGAAGAAGAAGAGGAAGATGAATACAAGGAAGAGGATGCAGATGAGGATGAGGAAGAGGATGTGGATGAGGATTTTGATTATGATGATGATGAGGAATTTACACCAGAGGAAGAAGATTATTCAGATGAGGAAGAAGAACTGAGGGGTAGAAAGAAGAAAAGTAATAGCGTAAAAATGGGCAAAAAGGTTTTGCAGAAGCGGGTTTCTATTACTTCTAGAGGTCGTAAAAGAAGGAGGAAACCTAGAGCTGCAAGGAAACCCTTGAGCAAGAAAAGAAGAAAGAACGGAGGGTTGAGGAGGAAAGTAAAATGTGATGATGAAGGTGATTCAATAGATAATAGGCCAACCATCAGAACAAAGAGTAAGAAAAAACCAAGTCGAAAAAGGAGAAGAGTTCTTGCTGATTCAGATTCAGATTGTGTGTCATTCGGATCATCAGATTATGAGTATACCATCTCTGAAGAAGAGAGAGAACAGGTGAGAGAAGCTGAGGAATTGTGTGGAATTTTGAGAACTAACTTGAGGAGTTCATCCCTTCTGATTAAAAATGAAGAGGTTAGAGTCCATGAAGATATACATCCGCAAAGGAAACCTCCAGTTCGGAAAGGTAAGGAAAAGATAGAGGAACTTCAAGGAAGAAAGGGTAAGAGCAACGTAGAGGATTTAAAAAGTGAGGTAGGAAAGCAGGTGTGCGGAATTTGTTTTTCTGAGGAAAATAAAAGAAGAGTAAGGGGAGTATTAAATTGTTGCACACACTATTTCTGTTTTGCTTGCATAATGGAGTGGGCAAAGGTGGAATCCCGATGCCCTTTGTGTAAGCAGAGATTTCAGACAATCAGTAAACCTGTACGATCAACGGCAGGGATTGATTTGAGAGGATCAGTGATACAAGTTCCTGAACGTGATCAGGTTTATCAGCCCTCTGAAGAAGAACTCAGGAGCTATATCGATCCTTATGAGTATGTAATTTGTTCAGAGTGCCATCAAGGTGGAGATGATGACCTCATGTTACTGTGTGATCTCTGTGATTCACCTGCACACACTTATTGTGTTGGTCTGGGTCGGGAAGTACCTGAAGGTAATTGGTATTGTGATGGTTGTAGACCAGTTGCATTGGGATCTTCAAGTTCCCAAGTTCAAGAATGTGCAGCTGATCCTAGGGTGACAATTCAGAGCTTGCCTGGCAGACCATCACCTGTTGGGCATGCACGAGAAAGTATAGACCTCAACTTGATGTCTTCTCCTCGTACATCTCTCACTCAAGGATTTGGGAATCTTTCTTCTTCTAGATTTTCTGGTAGAAGTGTTGACGGAGCTTCTCCAGTATCTGGAGGAGGGGCACCAACTTTATCAGAGAGGCGCTGGATACACCGTCAAATTCAGCAATTGCTTTCAATAGATAGAATGACTTCTACAACTGGCAGATCTAATGGAATTTCGGCTACCAGTTCAACTGGTAACTTATATAGCTCTCAAATTGATCAAAGTAGGGACACAACCACTCAAGATACAAGGACACAGGATGTGGGAACATCTTATCACAGATTCTTTGAGGAGAGATTATGCAACAATACCTCTTCATTAATGCAGAATGGTGATTTATTCTCCATGAGATTAAACAATTCAAGGAGGCCGGTAGTTCAAGATTCAACTTTGTTTACCAACAGAGCTATGAATGGGGCATTGTGGCCTGGACTTGTGGGGACACCCTCTCTATCAGATTATGAACAAGTCCATCAACTCAGCAGCAGTTCAAACTTCGTTACTGATGGTAGCATGCCCTCTGCTATTAGAGAAGAGAGTAACATTCACATTGCTAAGGAACAATTGTCATCAATGGTTAAAAGCCACCTGAATAGATTGTCACAAGATATTGATTTAGGCCACAGTACTACCAAGGACATCACAAGGGTTTCTCTACACACCATACTAGCAGCTTGTGGTCTTGAGCACAGCAAGAGTGAGGTTTGCGCTGTGCCCCCACCATCAGCTTGTCCCCACATTGAACTAATGGCTGGTGGACAAACGAGTCTGATTAAAGGCTGCTGCTCATCTTGCTTTGATTCTTTTGTAGGAGATGTGGTGAAGAGGATCATGGACACAAGAATGTCACAGTGGTTACGGTTAGGTCTTTAG | 2814 | 0.4268 | MALHGSLSLAPKLAPFLNPWFGAEGLCPTLNDQVMPLCLKLKQKHVNDQSSQKLNAQVPSWPRFRLVRSLEAIGARINFGPYERNPHTVGLEECLKSIGLNKPIPSMPAITEQMVRGGNVSSKRNFRRRVPSKEGVSDDSDEDYVVPDEGRDVSDFSEDSYHSLDGCTSEESFDNFVEDEEEEIEGIKNFRRSKTKNGVCGRLKIGSKASRKRGRMSYAEQLDEGKEEEEEDEYKEEDADEDEEEDVDEDFDYDDDEEFTPEEEDYSDEEEELRGRKKKSNSVKMGKKVLQKRVSITSRGRKRRRKPRAARKPLSKKRRKNGGLRRKVKCDDEGDSIDNRPTIRTKSKKKPSRKRRRVLADSDSDCVSFGSSDYEYTISEEEREQVREAEELCGILRTNLRSSSLLIKNEEVRVHEDIHPQRKPPVRKGKEKIEELQGRKGKSNVEDLKSEVGKQVCGICFSEENKRRVRGVLNCCTHYFCFACIMEWAKVESRCPLCKQRFQTISKPVRSTAGIDLRGSVIQVPERDQVYQPSEEELRSYIDPYEYVICSECHQGGDDDLMLLCDLCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQECAADPRVTIQSLPGRPSPVGHARESIDLNLMSSPRTSLTQGFGNLSSSRFSGRSVDGASPVSGGGAPTLSERRWIHRQIQQLLSIDRMTSTTGRSNGISATSSTGNLYSSQIDQSRDTTTQDTRTQDVGTSYHRFFEERLCNNTSSLMQNGDLFSMRLNNSRRPVVQDSTLFTNRAMNGALWPGLVGTPSLSDYEQVHQLSSSSNFVTDGSMPSAIREESNIHIAKEQLSSMVKSHLNRLSQDIDLGHSTTKDITRVSLHTILAACGLEHSKSEVCAVPPPSACPHIELMAGGQTSLIKGCCSSCFDSFVGDVVKRIMDTRMSQWLRLGL | 937 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 118 | 169 | - | - | |
Glsi02g3634 | 937 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 434 | 516 | IPR013083 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 325 | 345 | - | - | |
Glsi02g3634 | 937 | Pfam | PHD-finger | 549 | 595 | IPR019787 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 416 | 438 | - | - | |
Glsi02g3634 | 937 | ProSiteProfiles | Zinc finger PHD-type profile. | 547 | 596 | IPR019787 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 694 | 733 | - | - | |
Glsi02g3634 | 937 | Pfam | Ring finger domain | 456 | 499 | IPR001841 | - | |
Glsi02g3634 | 937 | SMART | PHD_3 | 549 | 594 | IPR001965 | - | |
Glsi02g3634 | 937 | CDD | RING-HC_Topors | 455 | 502 | - | - | |
Glsi02g3634 | 937 | ProSiteProfiles | Zinc finger RING-type profile. | 457 | 499 | IPR001841 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 294 | 324 | - | - | |
Glsi02g3634 | 937 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 522 | 597 | IPR013083 | - | |
Glsi02g3634 | 937 | SMART | ring_2 | 457 | 498 | IPR001841 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 203 | 362 | - | - | |
Glsi02g3634 | 937 | PANTHER | F18C1.6 PROTEIN | 247 | 928 | - | - | |
Glsi02g3634 | 937 | SUPERFAMILY | RING/U-box | 456 | 505 | - | - | |
Glsi02g3634 | 937 | SUPERFAMILY | FYVE/PHD zinc finger | 519 | 595 | IPR011011 | - | |
Glsi02g3634 | 937 | MobiDBLite | consensus disorder prediction | 223 | 269 | - | - | |
Glsi02g3634 | 937 | ProSitePatterns | Zinc finger RING-type signature. | 476 | 485 | IPR017907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g3634 | Glsi-ChrGlsi02 | 83088682 | 83096625 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g3634 | 544 | 593 | C2H2 Transcription Factor Family | AT3G01460 | 48.077 | 6.74e-09 | 58.2 |