Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3624 ATGGATATCGAGAAAAGACGTTCTAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAATGGAAAATCTCGAAAGAAGCTCTTCTGTAACAATCCTAACTCACCTGTAGATTTAAAGCAAGGAAAGGACAATGTGGAGAACATGCCAAAGTCACAGTTCAATAAGGCGAAGGTGGATGAGAATGGAATAAATTCAAGTAATATAGCAACTTGTGATTTAAACCCTGCACTATCAGTTATTAGTGATGAAGGATATGGGACTAGAGCACCGGGTTTAGTAGCGAGGCTCATGGGCTTGGATTCGTTGCCAACTTCAACAGTTGTTGAGCTCTCTTCCCCTACATTATATGACTCTAAATCTGTTAGATCTTCTCATTGTCTTGACTCGATGAGTGGCTATCACCCTATGGAATACATAAACACGCCACTTATGCTGGAAAAGTCTTCTTGGGATGCCATGGAATCAAGGGCGCATAAAGTGCCAAAGTGGCCAATTAAAAGATTTCAAACTGAAATGTTGCCTCCAAAGTCTGCCAAACCTATTCCTGTTACTCACAATAAACCATTGTCTTCTATAAAAGGTCATGGTTTTGTTCCACCCGAGAATGCAGCTGACACAATGGATGCAGCCGTTAAAATAATACAGGCAAGCCCCCAGCCATATATGAAGAATAAAATGTCATCAGCTGGCTGTTCATCTATTCCCTTGAGAATTCTTGATTTGAAAGAGAAATTAGAAGCTGCACAATATGCACCCACCCCTGAAAAGATTGTGGATACGACAACTGTCAACACCGTTATAGGCAAGCCAAGTGAGAGTGGCAATAATTTATATAAATGCACTTCAGTCTCCGAAGGTTCAAGAGATTTGAAAAAAATTAGTCTTCACCTATTGGGGAGTAAAGGAAAATCAGTTTCACTGGCAATAAAAGCCAAGGCTAGTGTTCAAAGCACTGATAAATTGATTTCAAATGGTAACAGAGGGTATATGCAGAAGAAACAGAATAAGATAATATTGAACCAGTTCTCCAGGACCCAGAAGCCAATTTCACATCAGGCAACGAAGCAGAGAACTTTTAGAAGCCGGAATAGCAATGTACTTCCACAAAATAATCAAAAGCAGAATAGTGTTACAAACAAAGGTAAATCAACTTCTAAAGAAGATTCCAAAAAGCCAACCACACGAACTCATTCTTCAGAAAGTTCTACTGGTGGAGCAAGGAAGACAACAAACAAGGATTCTGCAATTGCCAATATTGGGCACAAAAGGTCAAGCAGAAGGGCAACTGATACTCTAAAGGAGTTTCCACTATCCAAAACAAGGGATGTTCTAGAAGCAAGAGTACCTGATAATGCTGTAAATAATTATGAAAGTAAGTCCATAAAATGCAATATAACAACTGATAGAGGTGTGAACCAGGATGCATTAAGCAAGAAAGAAAGCAAGGATGTTATTTCCTTCACATTTACATATCCCCTGAGGAGAGAGTCACAATTCTCTACTCATACAAATAGTATTGATGTCAATTCTCTTGGTCATAGCAACAAGCTGTGTCCCGCAAAATTATCATTATCTCCTCCTGGGTTACATATGATAGATGGCGATGCTTTGAGTGTCCTGTTGGAGAGAAAGCTGCAAGAATTGACATCTAGAATCAATTCACCTCAATGTCCCCCGGCTAAAGAGGGGATTTCTGCTGGTTTACCATCCAGTGTGCAAGACAAAGTTCCCTGCGTGGCTAGCACCGAATCAAGGGAACGAGACAGAAGCTTTAATCCTAATCCACATAGTGATAAAATGCACAACATGCATGACAATGGTTGTTCTTCAAGCGATGATCTGGTGCTTGACATGAATCAGCGCCTGCAGGTCTTTTTCATTTCTTTTACACTGTCAGCTAAGGGATTGTTGTTGAAGGGTGTGGGGGATAAGCGTCAGTTCCTAAATACCCAACTGAAGCTATCAAATCCTCTGCAGCTGGGATCAGCAGCAGTGGAAGAGCACAGCTGTGGCAGCAACAGTGGAACTGGAAATGATCAAGGTTTGGACGCTCCTTTCGTTAGTGAAAGTTTCTCGGATAGTGAAGACGGTTCTCATGGCAGCAGAGTTTATTCTTCCATGCCAGACGAAGAAGCGTCTAATTTTTCTCCAATAATTGCCCAAGTAAAATGGTCTGAGCAGAGCTCTTGCTCACCAGCTAATAGATCAAATCTGATAGAATCTAATAGATCAAGGAACTTGGTTGGCAATGCAGAGTTGAAGGAAGAAGATTTTGTAATGGGTCAAACAAATCCTTTTGATCTGTTGGAGGATTGGAGCAGTGAAAGAGAAAGCAATGGAGAGGAGTACTCAGAGCTCGAGAGGAAGGTATTGTTTGACAGTGTGAGTGAGCACCTGGAATTTACATGCCGGCAAACTTTCGTTGAAAGCTACAAAACATGGCAGAATGAGGGTTGGCTGGCAGAAGACTTGTACAAGGAGATGCTGGGTTTGAAAAGCATGCAAGAGGTAATGGTGGATGAGGTTGTGAGCAAGGACATGAGCACTCGACATGGGAGATGGCTCGATTTTGACATTGAAGCATTCGAAGAGGGTTTAGAGATTGAATGGGACATATCAACTTCTCTGATTAGTGAATTGGTTTCTGATTTGTTGCTTGATTAA 2661 0.413 MDIEKRRSKGSFLSLFDWNGKSRKKLFCNNPNSPVDLKQGKDNVENMPKSQFNKAKVDENGINSSNIATCDLNPALSVISDEGYGTRAPGLVARLMGLDSLPTSTVVELSSPTLYDSKSVRSSHCLDSMSGYHPMEYINTPLMLEKSSWDAMESRAHKVPKWPIKRFQTEMLPPKSAKPIPVTHNKPLSSIKGHGFVPPENAADTMDAAVKIIQASPQPYMKNKMSSAGCSSIPLRILDLKEKLEAAQYAPTPEKIVDTTTVNTVIGKPSESGNNLYKCTSVSEGSRDLKKISLHLLGSKGKSVSLAIKAKASVQSTDKLISNGNRGYMQKKQNKIILNQFSRTQKPISHQATKQRTFRSRNSNVLPQNNQKQNSVTNKGKSTSKEDSKKPTTRTHSSESSTGGARKTTNKDSAIANIGHKRSSRRATDTLKEFPLSKTRDVLEARVPDNAVNNYESKSIKCNITTDRGVNQDALSKKESKDVISFTFTYPLRRESQFSTHTNSIDVNSLGHSNKLCPAKLSLSPPGLHMIDGDALSVLLERKLQELTSRINSPQCPPAKEGISAGLPSSVQDKVPCVASTESRERDRSFNPNPHSDKMHNMHDNGCSSSDDLVLDMNQRLQVFFISFTLSAKGLLLKGVGDKRQFLNTQLKLSNPLQLGSAAVEEHSCGSNSGTGNDQGLDAPFVSESFSDSEDGSHGSRVYSSMPDEEASNFSPIIAQVKWSEQSSCSPANRSNLIESNRSRNLVGNAELKEEDFVMGQTNPFDLLEDWSSERESNGEEYSELERKVLFDSVSEHLEFTCRQTFVESYKTWQNEGWLAEDLYKEMLGLKSMQEVMVDEVVSKDMSTRHGRWLDFDIEAFEEGLEIEWDISTSLISELVSDLLLD 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3624 886 Pfam Domain of unknown function (DUF4378) 765 878 IPR025486 -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 577 604 - -
Glsi02g3624 886 Pfam DUF761-associated sequence motif 77 105 IPR032795 -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 666 706 - -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 341 432 - -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 418 432 - -
Glsi02g3624 886 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 882 - -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 395 417 - -
Glsi02g3624 886 Coils Coil 768 788 - -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 579 604 - -
Glsi02g3624 886 MobiDBLite consensus disorder prediction 341 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3624 Glsi-ChrGlsi02 83031382 83034998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3624 746 884 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 37.748 9.55e-24 105