Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3620 ATGAAAATTTCGAAAACATTTACCAGAACCATAAACCATAACGATTACCTGGGATTATATGGAAGACAGGTCGTTGGGGTTGACAACACGTTCAGAAGAAAATTTGATCAAGAGGAGTATCTGGAACGAGCACGAGAGCGTGAGAGGCAGGTTGTTACTCCAGTAGCACCACTAAGCCAGCAGGCTGGATACTACTGCTCAGTTTGTGAGTGTGTAGTAAAGGATTCTGCAAGCTACTTGGATCATATTGATGGAAAGAAACGTACGCTGTCTGCTCAACATATTTGCCTTTATTTCTCTCGTGTAACTTTTTACATTAGTGCTTGCATGTATAGAGGCAGAAAAGCTTTTGGTGAGATGCAGGTTCAGGAACGATTTGAAGTTTTTCAAAACGTGAAGATATTGGCAGCTTCACAGTTCAAGAAGAAGGCTATTGAAGAACCTGAAACAGATCCTGATGTTGCAGTTATGATGGGGTTTGGCGGTTTCCGGTCATCCAAGAAATGA 507 0.4181 MKISKTFTRTINHNDYLGLYGRQVVGVDNTFRRKFDQEEYLERARERERQVVTPVAPLSQQAGYYCSVCECVVKDSASYLDHIDGKKRTLSAQHICLYFSRVTFYISACMYRGRKAFGEMQVQERFEVFQNVKILAASQFKKKAIEEPETDPDVAVMMGFGGFRSSKK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3620 168 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 49 92 IPR040107 GO:0000398|GO:0005681
Glsi02g3620 168 Pfam Zinc-finger of C2H2 type 64 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3620 Glsi-ChrGlsi02 82998129 83001938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3620 24 133 C2H2 Transcription Factor Family AT3G05760 43.151 5.79e-29 102