LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g3609	ATGGTGTGCCAAGAAGAGTTGTTGATTGGAAAAGTTTGCGAGCTTTATGATCAAATTTTAAGCCTAGAAAGTCTCAAACCTTGCAAAAATGTCGACAAGCTGTTCACCCAACTCGTCCTCACATGCATACCACCTAGCCCCATCGATGTTAGCAAGCTCAGCAAAAGTGTGCAAGAGATTAGAACCAAGCTCATAAGACTCTGTGGTGAAGCCGAAGGGCTCCTGGAGAGCCACTACTCCACCATCTTAGGCTCATACGACAACCCACTAGATCATCTCCATATTTTCCCCTACTATTCCAACTACCTCAAGCTTGGCCTCCTCGAGTTCACTATCCTTAGTCAGCACTGCACACATGTCCCTAGCAATATTGCCTTCGTGGGCTCAGGTCCCCTTCCCTTCACTTCAATTGTGTTGGCATCCAATCACCTCCCCACCACCACCTTCCACAACTATGACATCGACCCATTAGCCAATTCCATGGCTCTGCGCTTGTGTTCGTCTGACCCTGACCTGTCAAAGCGGATGGTTTTTCACACCAATGATATATTGGATGTGTCAAACGCTTTGAAAGAGTATGAGGTTGTTTTCCTGGCAGCTCTTGTGGGCATGGACAAAGAAGAAAAGAACAGAATCATAAAACATTTGGGCAAGTACATGGCCCCGGGGGCCCTTCTCATGCTAAGGAGTGCCCATGGTGCTCGTGCTTTTCTCTATCCGGTGGTTGATCCTTGCGATCTTGTAGGCTTTGAGGTCCTCTCCGTGTTCCACCCCACGGATGAGGTTATCAATTCAGTTGTCATAGCACGTAAATATCCCGTGCCTATGCATTCACACGATCAAGGCTTTGCCTCTGAGATTCTACCAAACAAGTGTTCTGAGATCCAAGTCTTCAATCCCCTTAACCATGGGAATCTTATGATTGAGGAATTGACCGTTGAGGAGCAATCATAG	954	0.4717	MVCQEELLIGKVCELYDQILSLESLKPCKNVDKLFTQLVLTCIPPSPIDVSKLSKSVQEIRTKLIRLCGEAEGLLESHYSTILGSYDNPLDHLHIFPYYSNYLKLGLLEFTILSQHCTHVPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPLANSMALRLCSSDPDLSKRMVFHTNDILDVSNALKEYEVVFLAALVGMDKEEKNRIIKHLGKYMAPGALLMLRSAHGARAFLYPVVDPCDLVGFEVLSVFHPTDEVINSVVIARKYPVPMHSHDQGFASEILPNKCSEIQVFNPLNHGNLMIEELTVEEQS	317

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g3609	317	PANTHER	NICOTIANAMINE SYNTHASE 3	4	312	IPR004298	GO:0030410\|GO:0030418
	Glsi02g3609	317	ProSiteProfiles	Nicotianamine synthase (NAS)-like family profile.	1	276	IPR004298	GO:0030410\|GO:0030418
	Glsi02g3609	317	Gene3D	Vaccinia Virus protein VP39	7	273	IPR029063	-
	Glsi02g3609	317	Pfam	Nicotianamine synthase protein	5	273	IPR004298	GO:0030410\|GO:0030418

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g3609	Glsi-ChrGlsi02	82935245	82936198	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g3609	3	312	Nicotianamine Synthase Gene Family	AT1G56430	60.317	1.00e-134	384

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi02g3609	02	82935245	82936198	Glsi02g3609	02	82935245	82936198	ECH

Showing 1 to 1 of 1 entries