Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3609 ATGGTGTGCCAAGAAGAGTTGTTGATTGGAAAAGTTTGCGAGCTTTATGATCAAATTTTAAGCCTAGAAAGTCTCAAACCTTGCAAAAATGTCGACAAGCTGTTCACCCAACTCGTCCTCACATGCATACCACCTAGCCCCATCGATGTTAGCAAGCTCAGCAAAAGTGTGCAAGAGATTAGAACCAAGCTCATAAGACTCTGTGGTGAAGCCGAAGGGCTCCTGGAGAGCCACTACTCCACCATCTTAGGCTCATACGACAACCCACTAGATCATCTCCATATTTTCCCCTACTATTCCAACTACCTCAAGCTTGGCCTCCTCGAGTTCACTATCCTTAGTCAGCACTGCACACATGTCCCTAGCAATATTGCCTTCGTGGGCTCAGGTCCCCTTCCCTTCACTTCAATTGTGTTGGCATCCAATCACCTCCCCACCACCACCTTCCACAACTATGACATCGACCCATTAGCCAATTCCATGGCTCTGCGCTTGTGTTCGTCTGACCCTGACCTGTCAAAGCGGATGGTTTTTCACACCAATGATATATTGGATGTGTCAAACGCTTTGAAAGAGTATGAGGTTGTTTTCCTGGCAGCTCTTGTGGGCATGGACAAAGAAGAAAAGAACAGAATCATAAAACATTTGGGCAAGTACATGGCCCCGGGGGCCCTTCTCATGCTAAGGAGTGCCCATGGTGCTCGTGCTTTTCTCTATCCGGTGGTTGATCCTTGCGATCTTGTAGGCTTTGAGGTCCTCTCCGTGTTCCACCCCACGGATGAGGTTATCAATTCAGTTGTCATAGCACGTAAATATCCCGTGCCTATGCATTCACACGATCAAGGCTTTGCCTCTGAGATTCTACCAAACAAGTGTTCTGAGATCCAAGTCTTCAATCCCCTTAACCATGGGAATCTTATGATTGAGGAATTGACCGTTGAGGAGCAATCATAG 954 0.4717 MVCQEELLIGKVCELYDQILSLESLKPCKNVDKLFTQLVLTCIPPSPIDVSKLSKSVQEIRTKLIRLCGEAEGLLESHYSTILGSYDNPLDHLHIFPYYSNYLKLGLLEFTILSQHCTHVPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPLANSMALRLCSSDPDLSKRMVFHTNDILDVSNALKEYEVVFLAALVGMDKEEKNRIIKHLGKYMAPGALLMLRSAHGARAFLYPVVDPCDLVGFEVLSVFHPTDEVINSVVIARKYPVPMHSHDQGFASEILPNKCSEIQVFNPLNHGNLMIEELTVEEQS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3609 317 PANTHER NICOTIANAMINE SYNTHASE 3 4 312 IPR004298 GO:0030410|GO:0030418
Glsi02g3609 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Glsi02g3609 317 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Glsi02g3609 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3609 Glsi-ChrGlsi02 82935245 82936198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3609 3 312 Nicotianamine Synthase Gene Family AT1G56430 60.317 1.00e-134 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3609 02 82935245 82936198 Glsi02g3609 02 82935245 82936198 ECH