Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3605 ATGAAGCTGCTTTCTCGACTGATTGTTTTCCCTATTTTTGTGCTCGTCAACTGGTGTTTCTGGGTTGGTAGAGCAGAAGATTGTGGTGGGAACAAAGTTGCATATACCACTACCGTGGGTCAATCTGGCGGAGGAAAATTCAGAACGGTTCAAGCAGCCATTGATTCTATAAAAAATAACAATGATCGATGGGCCAAAATTCACATAAATGCTGGCACATACACAGAGAAGGTCCAAATTCCCGATGAAAAACCGTGCATTATATTGGAAGGCGAAGGCAGAGAAGTCACCACTATTACATACGACGACCACGAACAAACAGATACGAGCGCCACATTCTCTTCGCTTTCAGACAATGTGGTTGTGAAGGGCATCACCTTCAAGAACTCGTTTAATCTGGCTGCCGCGTTAGATTTGAACAAAAGGACAAAGGGAAGCCAAGTCACACAAGCAGTGGCAGCAAGAATATATGGACAGAAATCGGCCTTTTACGACTGTGGTTTCTTGGGTTTTCAGGATACACTGTGGGATGTAGAAGGTCGTCATTACTTCAAAAATTGCTACATTGAAGGTGCTATAGACTTCATTTTTGGCAGTGGGCAGTCCTATTACGAGGATTGTGTGATGAATGCGACGTTAAAGACAACAAGTGCAGAGGTCCCTTTGGGTTATATAACAGCCCAAGGCCGAAGTTCACAAAATGACCCAAGTGGTTTTGTATTCAGAGGAGGTTCGGTTGTGGGCAGTGGTGAAGTGATTCTAGGGAGAGCCTATGGCCCTTACTCCAGAGTTATATTTTACGGAACATATTTGGATTCGGTGGTAACCCCTCAAGGATGGGATGCTTGGCGACACACAGGCGGAGAGTCTAATTTCACTTATGCTGAGGTTGAGTGTAGAGGCCCAGGGGTGAAAAATGGGAAGCGCGTCTCATGGGAGAAGAAGCTCAGTAGTTCACAGCTGCATGAATTTTCGATATCTTCGTTCATAGACCAAGATGGGTGGATTGCCAAATTACCATGA 1023 0.4497 MKLLSRLIVFPIFVLVNWCFWVGRAEDCGGNKVAYTTTVGQSGGGKFRTVQAAIDSIKNNNDRWAKIHINAGTYTEKVQIPDEKPCIILEGEGREVTTITYDDHEQTDTSATFSSLSDNVVVKGITFKNSFNLAAALDLNKRTKGSQVTQAVAARIYGQKSAFYDCGFLGFQDTLWDVEGRHYFKNCYIEGAIDFIFGSGQSYYEDCVMNATLKTTSAEVPLGYITAQGRSSQNDPSGFVFRGGSVVGSGEVILGRAYGPYSRVIFYGTYLDSVVTPQGWDAWRHTGGESNFTYAEVECRGPGVKNGKRVSWEKKLSSSQLHEFSISSFIDQDGWIAKLP 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3605 340 SUPERFAMILY Pectin lyase-like 33 337 IPR011050 -
Glsi02g3605 340 ProSitePatterns Pectinesterase signature 2. 189 198 IPR033131 -
Glsi02g3605 340 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 337 - -
Glsi02g3605 340 Pfam Pectinesterase 37 332 IPR000070 GO:0030599|GO:0042545
Glsi02g3605 340 Gene3D - 30 339 IPR012334 -
Glsi02g3605 340 FunFam Pectinesterase 31 340 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi02g3605 Glsi-ChrGlsi02 82896476 82898017 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3605 23 289 Carbohydrate Esterase AT2G19150 46.269 8.12e-74 228