Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3599 ATGTCGGACACAGACCAACATGGTGTGCTCCTCTACTACAAGTATACTCAAATTCCGCATCTTAACGACCTCCTCACATTCTACCAGTCTAACTGCTCCTCGCTTGCCCTCCTCGGTCGCGTTCGTCTCTCTTCCCATGGCGTCAATGTCACTGTTGGTGGCAACTTATCCTCTCTGGAGAGACACATTGAAGCGGTCAAGGCTAATAGCTTATTTGAAGGGACTGATTTCAAGCTTGCCACTTGTCATCAACCATTAAATGACAAGGTTGCTAAGGAATGCGGATTTACTTCTCTATCAGTTCGAATTGTCAAGGAACTGGTTACTCTTAGTTCTCATCCCCTATTAAAGTCGCCAGAAATATCAAATGCTGGAAGACATCTCTCTGCAGTGGAGTTCCATTCTGTCCTTGAGAATGTCGACAAAGAGAGTCCAGCAAACAGCCTCGTTTTACTTGATGCAAGGAATGTATATGAGACAAGAATTGGGAAATTTCATGCACCAAATGTTCAAACTTTGGATCCTCAAGTAAGACAGTATAGTGATTTATCATCATGGATAGATGGTAATAGTGAGCAACTGAAAGGGAAACAAATCCTCATGTATTGCACTGGTGGAATCAGGTGTGAAATGGCATCTGCATATATTAGGTCAAAAGGTTTGGGCTTTGAGAATGTGTTTCAGCTATTTGGTGGGATACAACGATATTTGGAGCAATTTCCAGATGGTGGTTTCTTCAAAGGAAAGAATTTTGTTTTCGATCATAGGATATCTGTTGGAAGTTCAGATGCAAATATTGTGGGTATCTGCCTTGTTTGTGGATGTTCATTTGATGATTACTCTTCACGCTGCCGATGCACCTATTGCAGAATGCTTGTTTTGGTCTGTAGTAGTTGCCAGAATGAAGCTGCACTCTATATTTGTGAACTATGCCAAAAACAGGGCAAGGCTGTTTGGCCAATGCAGTTAATTGAAATCAGTGAATCAGAAACACCATTGCCAGATGTTGAGTTCCAAAAGGGTTCCTCGGATACTATATTTTCACCTCAAATGCATTGGCAAGATGATGTCAAGTCTTCAAGGAAACTCAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCCAGTTTTAAAGGAAGAACAGCATCATTAGCCAAAAAACTCAAGAAAATAGCTGACTTTGTTTTTATAGATGCACCTCATGAGTTGCCATATATTTATCAAGCCCCCATGTTGGGGCATCATGTGAATAGGGTATCATCTTCATTGCCCCCAAGTCCTCCTCCACCTTTGATGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCAAATTTTGATGGAAGAAGTAGAGGTGATTGGGAAGTAGCAGATGGCCCGTTTGATCCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCACTAGCTCACTTGAAGGATGTGTTTTCCCGCGAAGGGCCATTTGATGGGATACTGGGATTTTCACAGGGAGCTGCAATGGCTGCCTTAATCTCTGCTCAACAAGACAAGCTAAAAGGTAAAATGGACTTCAGATTTGTAATCTTGTGCTCAGGCTTTGTTATCCGTACAAAGGAGATGGACTGTGGGTTGATTAAATGCCCTTCTCTTCACATTTTTGGTGATGACAATGGAAAAGACAGGCAGATAGTTAACCAAGCTAGCAAGGAACTTGCTTCTCTGTATGATGGTGGTTGTTCGGTGATTGTTGAACATGATTGTGGTCATATTATTCCTACACGATCTCCATATATTGATGAAATCAAGGATTTCCTAAAGCGTTTTCTAAACTGTACAATGCTAATGTATCGTAAGGTTTCACTTCAGACAGTGTTGAAAGAAAATATTGTGTTTGTTACTCACTTTGAAATCTGTGATTGTTGGGGAATGTCGCGTAGGTTGAATGCTGTCAAAACACTAGCCAAAGCGGAAATGGTATTGAGCTACCTTTTTCTGTCTGCTGTTCGATTCAAATTTATTCGAAATCAAAATCTGTTTTGGAAGTTAGTCGGAGCACAAGTTGGGGTCGGGACGCTGGTCCAGCAAGCTGGGCCACATGGACTCTGCCTTCTTGACACCGGAAATTGCATTTTAATTTTTCACTTTACCATATGGGTCTCATTTAATGTCTTATCAGCATTAAATGGAAGGGAACTATATCTACCCCACCCTGTCTCTCCCTTGGACACCCCACGGATCCCATTATCAAAAGCAACAGATCGAAAGATGTCTCTACTCACAGGGGATGTCAAAGCCAAAGCAGAGGTGTACCATGGAGACGAACTCTGCCAAGAAAAGTCCAAGTTCTTGCTCAAGGAAGTAGGGCTACCCACTGGCCTTTTGCCCTTGAAGGACATGGAAGAATGTGGGTATGTGAGGGAAACTGGATTTGTGTGGCTTAAGCAGAAGAAGAACACAACCCACAAGTTCGACAAGATTGGGAAGCTGGTTTCCTACGCCCCTGAGGTCACTGCCCAGGTTGAGAAAGGCAAGATCAAGAAGCTCACGGGGGTTAAGACCAAGGAGCTCTTGGTTTGGATCACACTCAGTGATATCTATGTGGATGATCCACCCTCTGGCAAAATCACATTCAAAACCCCAGCAGGGCTCTTCAGGTCATTCCCAGTGTCGGCTTTTGAAATTGAAGAGCCAGTGAAGGAGGGTAAGCAAGTTAAAGAAGCAGCTGCAGCTGTGGAAGTGAAAGAGGTCTGA 2739 0.4297 MSDTDQHGVLLYYKYTQIPHLNDLLTFYQSNCSSLALLGRVRLSSHGVNVTVGGNLSSLERHIEAVKANSLFEGTDFKLATCHQPLNDKVAKECGFTSLSVRIVKELVTLSSHPLLKSPEISNAGRHLSAVEFHSVLENVDKESPANSLVLLDARNVYETRIGKFHAPNVQTLDPQVRQYSDLSSWIDGNSEQLKGKQILMYCTGGIRCEMASAYIRSKGLGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIVGICLVCGCSFDDYSSRCRCTYCRMLVLVCSSCQNEAALYICELCQKQGKAVWPMQLIEISESETPLPDVEFQKGSSDTIFSPQMHWQDDVKSSRKLRILCLHGFRQNASSFKGRTASLAKKLKKIADFVFIDAPHELPYIYQAPMLGHHVNRVSSSLPPSPPPPLMNCKKKFAWFVAPNFDGRSRGDWEVADGPFDPLQYQQQTDGYDISLAHLKDVFSREGPFDGILGFSQGAAMAALISAQQDKLKGKMDFRFVILCSGFVIRTKEMDCGLIKCPSLHIFGDDNGKDRQIVNQASKELASLYDGGCSVIVEHDCGHIIPTRSPYIDEIKDFLKRFLNCTMLMYRKVSLQTVLKENIVFVTHFEICDCWGMSRRLNAVKTLAKAEMVLSYLFLSAVRFKFIRNQNLFWKLVGAQVGVGTLVQQAGPHGLCLLDTGNCILIFHFTIWVSFNVLSALNGRELYLPHPVSPLDTPRIPLSKATDRKMSLLTGDVKAKAEVYHGDELCQEKSKFLLKEVGLPTGLLPLKDMEECGYVRETGFVWLKQKKNTTHKFDKIGKLVSYAPEVTAQVEKGKIKKLTGVKTKELLVWITLSDIYVDDPPSGKITFKTPAGLFRSFPVSAFEIEEPVKEGKQVKEAAAAVEVKEV 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3599 912 FunFam Rhodanese-like domain-containing protein 6 1 108 - -
Glsi02g3599 912 Gene3D - 1 108 - -
Glsi02g3599 912 Pfam UPF0176 acylphosphatase like domain 9 106 IPR040503 -
Glsi02g3599 912 FunFam esterase OVCA2 isoform X6 359 606 - -
Glsi02g3599 912 SUPERFAMILY At5g01610-like 752 892 IPR036758 -
Glsi02g3599 912 Gene3D - 117 269 IPR036873 -
Glsi02g3599 912 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 115 273 - -
Glsi02g3599 912 SUPERFAMILY alpha/beta-Hydrolases 358 606 IPR029058 -
Glsi02g3599 912 Pfam Serine hydrolase (FSH1) 361 596 IPR005645 -
Glsi02g3599 912 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 111 259 IPR036873 -
Glsi02g3599 912 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 604 IPR020936 -
Glsi02g3599 912 Pfam Rhodanase C-terminal 247 312 IPR022111 -
Glsi02g3599 912 Gene3D alpha/beta hydrolase 359 607 IPR029058 -
Glsi02g3599 912 ProSiteProfiles Rhodanese domain profile. 145 245 IPR001763 -
Glsi02g3599 912 Pfam Protein of unknown function, DUF538 779 889 IPR007493 -
Glsi02g3599 912 Gene3D - 757 901 IPR036758 -
Glsi02g3599 912 SMART rhod_4 135 242 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3599 Glsi-ChrGlsi02 82835502 82843181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3599 1 605 Sulfurtransferasese or Rhodanese AT1G09280 62.890 0.0 779