Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3598 ATGGCCGATGAGGCGGGTTCGAAACCCTTGAGAGAAATGCTGGATCTTAACCAGCTTCGGCCCGTGGCCCCAAGAGAGACTGACCGCGAATTCAAGTTCGGCGAAGAGGTCGATGCATATCAGAATGATGGCTGGTGGGAAGGCTCCATAACCGAAGATTTGGGAAAAGGGAGGTTCGCGGTGTTTTTCAGGGTCTCAAGGGAGCAGATTGAGTTTGGGAAGGAGGACCTCAGGCTTCACCGCGAGTGGATCAATGGTAGGCATTTGTGGTTCGAATTTGCAGTTGAGGGTGAATTTATCAGACTTGTCATTGCTTTTACTGCTCTCACTGAGTGTTGCTCGGAGCTTGTTCCCGTTGCTCCAGGAATATTGTGGGCAGAGGAATACGAAAATTTGACAAAGGAAGTGAAGTCTAGTGAAACAGTGACAGAAGTGAAGTCTAGTGAAACAGGGACGGAAGTGAAGTCTAGTGATACAGTGATGGAGAAGTTTAGCAAGGGGACACTTGTTGAGGTTAGCAGTGATGAAGATGGTTTCCAAGGAGCTTGGTTTGCTGCCACTGTTGTTGAACCAAAGGGAAAGGATAAGTTCCTTGTTGAGTACCAGAGCCTACGGACTGATGACGATTCAGAGTTTTTGAGAGAGGAAATTGATATCTTACATATTCGGCCTTCTCCACCAGAAATTTGTGTTCCTGATCGCTTTAATCTTCTTGAAGAAGTTGATGCTTTGTACAATGACGGATGGTGGGTCGGGGTGATATCCAAAGTTCTCCGCAATTCAAAGTACGTAGTTTACTTCAGGAGCAGCAATGAAGAACTGGAGTTTCAGCACCCCCAGTTAAGGCTACATCAAGATTGGATCAATGGCAAATGGGTTATGGCTTCTAAGATGCCACGAGTTCTCCAGATTGATCATGTGCAGTTTCATGACATTGGCATAATATTGAAATGCACAGTTGATTATATTTCACATTATATGCGCATTGAAGTTCTGAAGGTTCCTACTTACTGTGAAGATGGCGATAAAATTTCACTTGCTGCCTCACAAATATTGTAG 1059 0.4504 MADEAGSKPLREMLDLNQLRPVAPRETDREFKFGEEVDAYQNDGWWEGSITEDLGKGRFAVFFRVSREQIEFGKEDLRLHREWINGRHLWFEFAVEGEFIRLVIAFTALTECCSELVPVAPGILWAEEYENLTKEVKSSETVTEVKSSETGTEVKSSDTVMEKFSKGTLVEVSSDEDGFQGAWFAATVVEPKGKDKFLVEYQSLRTDDDSEFLREEIDILHIRPSPPEICVPDRFNLLEEVDALYNDGWWVGVISKVLRNSKYVVYFRSSNEELEFQHPQLRLHQDWINGKWVMASKMPRVLQIDHVQFHDIGIILKCTVDYISHYMRIEVLKVPTYCEDGDKISLAASQIL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3598 352 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 157 - -
Glsi02g3598 352 CDD Tudor_Agenet_AtDUF_rpt1_3 164 227 - -
Glsi02g3598 352 SMART agenet_At_2 29 85 IPR014002 -
Glsi02g3598 352 SMART agenet_At_2 162 230 IPR014002 -
Glsi02g3598 352 SMART agenet_At_2 233 289 IPR014002 -
Glsi02g3598 352 CDD Tudor_Agenet_AtDUF_rpt2_4 34 79 - -
Glsi02g3598 352 Pfam Agenet domain 167 227 IPR008395 -
Glsi02g3598 352 CDD Tudor_Agenet_AtDUF_rpt2_4 237 283 - -
Glsi02g3598 352 Gene3D - 152 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3598 Glsi-ChrGlsi02 82831791 82834181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3598 174 287 PHD Transcription Factor Family AT5G58610 30.370 4.42e-09 56.2