Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3587 ATGGGTGCCGATGGCAATTCAAAGCCGACGATCGAGATCAATGATCTGAGATTCACATACCCTGGAATCGATGGCCACCCACCGCCGGGTTCCACTCCTCTCATCCAAGATTTCTCTCTCACCGTCAATTCCGGCGATCGATGCCTTCTCGTCGGATCTAATGGCGCTGGCAAGACCACTATCCTTAAGATCCTAGGAGGAAAGCACATGGTGGAGCCAGAAATGGTTCGTGTACTTGGAAGATCAGCTTTTCATGACACCTCTTTAGTATCTTCTGGTGACCTTTGCTATCTTGGTGGAGAGTGGAGGCGAGATGTTGCATTTGCAGGGTTTGAGGTTCCAATACAAATGGATGTTTCTGCGGAAAAACTTATATTTGGGGTAGGTGGGATTGATCCTGGAAGAAGAGCAGAGCTAATCAAGGTATTAGATATCAATCTTTCCTGGAGGATGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTTAAGCCATTCAAGGTTCTTCTTCTTGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGGGCTGACCTTCTGAAGTTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACAATTATCTATGCAACGCATATATTTGACGGTCTTGAGAATTGGCCTACACATATAGTTTATGTGGCTCATGGAAAGCTGCAACTGGCAATGCCCATGGATAAAGTCAAAGACATTAGCAAATTGTCACTGATGAGAACAGTTGAAAATTGGCTGAGGAAAGAACGAGATGAAGAGAGAAAGAGAAGGAAAGAGAGGAAGGCATTGGGTCTTCCTGAATTTGAGAAGCAAGTTGAGGGAAGCCGGGTAACAGGGGATCCAGCTCGAGTAATGAATAATGGCTGGGCGGCCGGGCGACTAAATCCCACCATTGCTGGTGAGGAGAACTTTCTCCTAAGCTCTAACAGAGTACTGAGGCAGTAG 978 0.4571 MGADGNSKPTIEINDLRFTYPGIDGHPPPGSTPLIQDFSLTVNSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTSLVSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKLIFGVGGIDPGRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPTHIVYVAHGKLQLAMPMDKVKDISKLSLMRTVENWLRKERDEERKRRKERKALGLPEFEKQVEGSRVTGDPARVMNNGWAAGRLNPTIAGEENFLLSSNRVLRQ 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3587 325 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Glsi02g3587 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 247 IPR027417 -
Glsi02g3587 325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
Glsi02g3587 325 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 10 258 - -
Glsi02g3587 325 Gene3D - 2 281 IPR027417 -
Glsi02g3587 325 SMART AAA_5 44 231 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi02g3587 Glsi-ChrGlsi02 82788286 82791689 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3587 11 227 Calmodulin-binding Proteins AT2G36910 23.504 5.11e-09 55.8