Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3585 ATGGCGAGTGGAATCATCCCATTTCTGGCCATGGTTTTTGTGCAAACGGGGTATGCAGGCATGAATATAACCTCAAAGCTTGCTTTACAATCAGGCATGAACCCTCTTGTGCTTGCTGCTTATCGCCAAATCTTTGCCACTATAGCCATTGCTCCCTTTGCTTATTGGTTGGAACGCAAAACAGTTCCCAGGTTGACACTGCCCCTTATGTTCCAGATATTATTATCTTCCTTAACTGGGGTTACAGGAAACCAGGTATTGTTCTTCGTGGGGCTAAAATATTCAAGTGCTACAATTTCATGTGCAATGACAAATTTGCTCCCAGCTTTCACTTTTGTCCTTGCAGTCCTCTTCAGACAAGAGTATGTGAGGATTAAGAAGTGGAGTGCGCAAGCAAAGGTGCTAGGGACCATAATGTGTGTGGGTGGAGCGCTGATATTATCATTTTACCATGGAAAAACCATTGGCTTAGGTGAATCAAGTATTCACTGGGGATATGCAGAGAGAATGGAAGGACGACCGAGCTCCTCCGCCAAAACAAACTCGTTCCTTGGCCCTTTCTTCTTAATTACTAGTGCTCTTGTGTGGGCAGTGTGGTTCATAATCCAAGCAGACATGAGCAAAAAGTTTCCAGCTCCTTATACGAGCACAGCCTACATGTGCTTTCTGGCAAGCATTCAGTGTGTGGTCATTGCCTTGTGTTTCGAGCACAGAACCTCAGCTTGGTCTCTTGCCAATACTATCAGACTCACTTCTTCAATTTATGCGGGAATTATTTGCACAGGGACAGCGTTTTGCCTCATGTCGTGGAGCATTGAGAGAAAAGGTCCTCTTTATGTGTCTGTGTTCACCCCCTTGCAGCTTGTCATCACCGCTTTTGTCAGCTGGGCTCTTCTTCGTGAGAAATTATATGTTGGAACCGCCGTAGGGTCCTTCCTGATTGTTTTCGGGCTCTACTCTGTTTTGTGGGGAAAGAACAAAGAGATGAAGAAGAAAGATGGTGTTCAAGATATAGAAGCAACGACGGAGAAGGAAGCGAAAAATGACTTGGAGTTACAATCTTCAAATGGGAGCCATCAGTGTAGGAGCTTATTCTTGCCTGGCGAGGCTCTCATTGGATCTGCACTTGAATCAGTGATCGGGTCATCTCCATCTGGAATAAGAGATGGGGCTCTCTTTCACCAAACTTTTTAG 1194 0.4514 MASGIIPFLAMVFVQTGYAGMNITSKLALQSGMNPLVLAAYRQIFATIAIAPFAYWLERKTVPRLTLPLMFQILLSSLTGVTGNQVLFFVGLKYSSATISCAMTNLLPAFTFVLAVLFRQEYVRIKKWSAQAKVLGTIMCVGGALILSFYHGKTIGLGESSIHWGYAERMEGRPSSSAKTNSFLGPFFLITSALVWAVWFIIQADMSKKFPAPYTSTAYMCFLASIQCVVIALCFEHRTSAWSLANTIRLTSSIYAGIICTGTAFCLMSWSIERKGPLYVSVFTPLQLVITAFVSWALLREKLYVGTAVGSFLIVFGLYSVLWGKNKEMKKKDGVQDIEATTEKEAKNDLELQSSNGSHQCRSLFLPGEALIGSALESVIGSSPSGIRDGALFHQTF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3585 397 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Glsi02g3585 397 Pfam EamA-like transporter family 9 148 IPR000620 GO:0016020
Glsi02g3585 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Glsi02g3585 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 327 - -
Glsi02g3585 397 PANTHER WAT1-RELATED PROTEIN 7 336 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3585 Glsi-ChrGlsi02 82780063 82784210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3585 3 363 Nodulin-like Gene Family AT1G09380 57.027 2.80e-150 428