Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g3579 | ATGATATTTGTTTCGTCATGTATCTTTGTTGTATTAAAGGCAGATTTAGATATATATGCTGTCTGCAATTTGTTTTTTCCTTCGTTTGCGTCAGTGGTCTCTGGTGAAACGAAAGAGGACAAAGTCGAGCTCAGGCTTCAGCTTCAACAACTTCCTCAGGGTACTCAAAGGTTGGAAGGTCCACCTTATGCCCAATCTTTTCTTTGCAAGGAGGTTGGCTACAGAATGGGCTACCACGTTGAGCTCACAAGGGGTCCAAACAAACTGCAATTTTCTCCCGTCAAAGGTGCACTTGTTGATCAAAACGGGGATATGAGAGAGAGAGAGATTAGAATGCCGCTGGGGAAGTATTACTGCGACTACTGCGACAAGCTATTCCAAGACACCGCCGTGGCTCGCAAACGACACCTTCAAGGTACCCAGCACCTCCGCGCCAAAGCTCTTTGGTACGACTCCTTCAAATTCCAAGATCCTAATCAGGCTTATTCAGAGGGATTAGGCAAAGGGGTTTGCAATCGCTTCGTCAAAACGGGATTTTGCCAATACGGTGATTCTTGCAAATATGTTCATCCAAAAAACCTGCCCTCTACCAACCCTCAAGGAGTACTTGGGAATATACAGTCAACAGCAATAATCATGGGTAGTCATTTGGTTGGTGGAAGCTCTACACCAGGAAATGTGGTACAAGATAGTATGGGAAAGCCATGGGGCAACCTACCTCCATCGCTGAAGCCTCCTCCCGAGGGTGGATATCCACCCCTTCCCTTTGTGGACTGGGGATAA | 783 | 0.4662 | MIFVSSCIFVVLKADLDIYAVCNLFFPSFASVVSGETKEDKVELRLQLQQLPQGTQRLEGPPYAQSFLCKEVGYRMGYHVELTRGPNKLQFSPVKGALVDQNGDMREREIRMPLGKYYCDYCDKLFQDTAVARKRHLQGTQHLRAKALWYDSFKFQDPNQAYSEGLGKGVCNRFVKTGFCQYGDSCKYVHPKNLPSTNPQGVLGNIQSTAIIMGSHLVGGSSTPGNVVQDSMGKPWGNLPPSLKPPPEGGYPPLPFVDWG | 260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g3579 | 260 | SMART | c3hfinal6 | 167 | 192 | IPR000571 | GO:0046872 | |
| Glsi02g3579 | 260 | Pfam | U1 zinc finger | 116 | 148 | IPR013085 | GO:0008270 | |
| Glsi02g3579 | 260 | SUPERFAMILY | beta-beta-alpha zinc fingers | 115 | 154 | IPR036236 | - | |
| Glsi02g3579 | 260 | Gene3D | Classic Zinc Finger | 114 | 160 | - | - | |
| Glsi02g3579 | 260 | SUPERFAMILY | CCCH zinc finger | 169 | 192 | IPR036855 | GO:0046872 | |
| Glsi02g3579 | 260 | SMART | ZnF_U1_5 | 114 | 149 | IPR003604 | GO:0003676|GO:0008270 | |
| Glsi02g3579 | 260 | Gene3D | - | 161 | 209 | - | - | |
| Glsi02g3579 | 260 | ProSiteProfiles | Zinc finger C3H1-type profile. | 165 | 193 | IPR000571 | GO:0046872 | |
| Glsi02g3579 | 260 | PANTHER | NUCLEASE-RELATED | 112 | 260 | - | - | |
| Glsi02g3579 | 260 | MobiDBLite | consensus disorder prediction | 239 | 253 | - | - | |
| Glsi02g3579 | 260 | MobiDBLite | consensus disorder prediction | 232 | 260 | - | - | |
| Glsi02g3579 | 260 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 170 | 192 | IPR000571 | GO:0046872 |
Transcription factors information