Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3574 ATGGCTATTCGCCTCCGTGACCCACGGGGCTGTCCTCGCGAATCCAGGGATCGGGGTTCCTACAAAATGGGTGCTGATCTTAATGCTGAATTATCCAAGAAAACTCCCATTTTTGGTCTTAAGGTTTGGGAAGTAATTGGAATTGCAGTTGGATTGTTTATTATAGTTATCCTGTCTGTGCTCTCACTTTGCCTTACATCACGGAAGAGATCAAGAAAAGCCAAAGACAAGATTCCCCTGAGTCAAATACCAACTGTGTCAAAGGAAATCAAGGAAGTGCGGGTTGAGCAAGTATCGGCAAATGGATTTGTTCCTCGTGATGGAATTCTTCTCACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAAGTTATGGTTCATTTGGGTGTGGGGAAGATGAAGAATGGGGATAATAGCAGTCATTCAGATTCATTTAACCGCTTAGAGAAAGATGGAGTTGGGTCACAGTCAGGAGAAGAAGGGAGCTCTGGCACGGTTACATTCTTTAGGCACACTTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGCCTTCCAGAGTTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAACATGCTACAAACCGATTTTCAAAAGAAAATGTGCTTGGTGAGGGTGGCTATGGAGTTGTTTATCGGGGGCAGTTGATCAATGGGACTCCTGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAGGTTGAAGCTATTGGTCATGTCCGACATAAAAACTTGGTTTGCCTTTTGGGGTACTGCATTGAGGGGACTTACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAGTGGCTCCATGGAGCTATGCGTCATCATGGTTATCTTACATGGGAAGCACGTATGAAGATTCTTCTTGGCACTGCTAAAGCTCTTGCATATTTGCATGAAGCAATTGAACCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGCTACTGGGTGCCGGGAAGAGTCATGTCACGACGCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAAGCAATTACTGGAAGAGATCCAGTTGACTATGGTCGTCCAACGCATGAAGTTAATCTGGTTGATTGGCTAAAGATGATGGTTGGAAGCAGGCGGTCAGAAGAGGTGGTGGACCCAAATATTGAGGTGAGGCCATCGACCAGAGCTTTAAAACGGGCCCTCTTGACCGCTTTGAGATGTGTAGATCCAGATTCTGAGAAAAGACCCAAGATGGGCCAGGTTGTACGGATGCTTGAGTCACATGAGTACCCTTTACCTAGAGAGGACCGAAGGCACCGAAGAAATCATGAAGGCAGCACGGAAATTGAATCCCAGAAGGAATATTCTGACACAGACAGGAGCGAGAGCAGAGGGTAA 1569 0.4468 MAIRLRDPRGCPRESRDRGSYKMGADLNAELSKKTPIFGLKVWEVIGIAVGLFIIVILSVLSLCLTSRKRSRKAKDKIPLSQIPTVSKEIKEVRVEQVSANGFVPRDGILLTIHDKSSDKESDKVMVHLGVGKMKNGDNSSHSDSFNRLEKDGVGSQSGEEGSSGTVTFFRHTSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEHATNRFSKENVLGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVCLLGYCIEGTYRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPNIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLPREDRRHRRNHEGSTEIESQKEYSDTDRSESRG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3574 522 FunFam Putative receptor-like protein kinase 193 286 - -
Glsi02g3574 522 SUPERFAMILY Protein kinase-like (PK-like) 195 492 IPR011009 -
Glsi02g3574 522 Pfam Protein kinase domain 212 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3574 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Glsi02g3574 522 SMART serkin_6 211 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3574 522 FunFam Putative receptor-like serine/threonine-protein kinase 287 498 - -
Glsi02g3574 522 ProSiteProfiles Protein kinase domain profile. 211 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3574 522 CDD STKc_IRAK 217 483 - -
Glsi02g3574 522 MobiDBLite consensus disorder prediction 133 166 - -
Glsi02g3574 522 Gene3D Transferase(Phosphotransferase) domain 1 287 497 - -
Glsi02g3574 522 MobiDBLite consensus disorder prediction 469 522 - -
Glsi02g3574 522 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Glsi02g3574 522 Gene3D Phosphorylase Kinase; domain 1 193 286 - -
Glsi02g3574 522 PANTHER OS01G0323000 PROTEIN 27 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3574 Glsi-ChrGlsi02 82722022 82727268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3574 188 484 Trihelix Transcription Factor Family AT1G70460 50.662 1.09e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi02g3574 Pkinase 5.1e-47 CL0016