Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3569 ATGGTGACCATGGGGGTGTCTATGATGGTGATTGCTGCCGTTACCATCGCTGTCGTTGCCGGAACCGACAACTCCAGACCAGGGGCAGTGAATATGAAAACCCTTCTCTCCGTTTGCAGCCAAACTGACAATCCAGAAATCTGTTATCGTAGTCTAAAATATGCAGGTGAAAGAGGCACACTTTTAAACTACGTGAAGGCTTCCATTAATGTAACCCTTGTAGAATTGAAGGTGGTGGCCATGCCTAAACCTGAGCTGGAAAGGAGCCTGACCCCTCTGCAGGCACTGTCTCATTTAGATTGCTTGGAATTTTTGGATTTGGGAATAGAAGAGCTAGAATCCATGTACACAAAAGCAGATTCTTCGGAGGAGGACTTGTCCAACATGAATCTAGATGAGGTTATGAACAGCTTAAGTGCTGTCATTTCGTACCAACAAACATGCTCCGAAGGCCTTTTGCAAACAAACGCCTTTGAAGCTTTTGGGTATTCCTTGGACATGCCCATTCTTCTTACAAGGATAGCCTTGGCCATTGTTCATAGTTTCACTGGGCATGGTGTTTTCAAATTTCGGAGACTCTTAACTGGGACTCATTTGGGAAAAGCAAGAGATAAATACCCAACATGGTTCTCAGCAGGAGATCGCAAACTCTTGGAGTCTCAAAGGGATGATGGTAATGGTAGTCATCCCCTGGCAAATGTAGTTGTGGCTCAAGATGGAAGTGGTCGTTTCTTAAACATAACCAAGGCACTCGATGCATGCCCAAGGAACAACAAGGATCCATGCATTATTTACGTCAAGAAAGGAAAATACGAGGAAAGAGTAGTGATTCCCAAGGATTTAAACCAAGTATTCATGTATGGTGATGGGCCAATGAATACGATTGTCAGTGGGATCCATAAAACGGAAGGGGAGCAAATTACAACATACAGATCAGCAACTTTAGTGGTAACTGGTAAAGGATTCATCTGCAAGGATATGGGTTTCATTGCCCCAATTGGTATGGAAGGAGCACCGGCATTGTTCGTGCTTTCTGATCATTCAGCATTCTTCAATTGTAAAATGGAAGGGGAGGAAGGAAGCTTGTTTGCAGCAGCACATCGCCAATTCTACCGAGACTGTCAAATTCTTGGCAGTGTGGGCATCATCAAGGGAGACTCTGCAACTGTAATTCAGAATTCAGACATCATTGTAAAGCATCAAATTTCTCCTCATTTTCATGCGACAAGAAATGTTGTGACTGCGCAATCTAGGATAGATAGGCATGAGAGAACTGGGTTTGTGATCCAAAACTGCACCATCAAAACAGACAGGGAAAACACAAGCGTCAGTCTTCCTGCTGGCACCACTTGCATGGGCACCCCGTACAGAGAATATTCGAGAACAATCATAATGGAATCGTTTCTGGGAGAAGTGATAGATCCAGAAGGATGGTGTAAATGGAGTGATAACTATGGCACTGAAACAGCAACCTTCCGTGAGTATAATAACAGAGGGCCTGGGGCCACAACTAAGGAGAGGGTCCGTTGGCAGGGCTACCAAACAGTTAGTCAGCGTGACCAAGTGGTGAGCTTCACTGCTGGTCAATTTATCCAAGCAGACCAATGGTTGCAAAGTGCAGGCATTCCATACTTTTCTGGGTTTGTCCCAGAAACGTAG 1659 0.4479 MVTMGVSMMVIAAVTIAVVAGTDNSRPGAVNMKTLLSVCSQTDNPEICYRSLKYAGERGTLLNYVKASINVTLVELKVVAMPKPELERSLTPLQALSHLDCLEFLDLGIEELESMYTKADSSEEDLSNMNLDEVMNSLSAVISYQQTCSEGLLQTNAFEAFGYSLDMPILLTRIALAIVHSFTGHGVFKFRRLLTGTHLGKARDKYPTWFSAGDRKLLESQRDDGNGSHPLANVVVAQDGSGRFLNITKALDACPRNNKDPCIIYVKKGKYEERVVIPKDLNQVFMYGDGPMNTIVSGIHKTEGEQITTYRSATLVVTGKGFICKDMGFIAPIGMEGAPALFVLSDHSAFFNCKMEGEEGSLFAAAHRQFYRDCQILGSVGIIKGDSATVIQNSDIIVKHQISPHFHATRNVVTAQSRIDRHERTGFVIQNCTIKTDRENTSVSLPAGTTCMGTPYREYSRTIIMESFLGEVIDPEGWCKWSDNYGTETATFREYNNRGPGATTKERVRWQGYQTVSQRDQVVSFTAGQFIQADQWLQSAGIPYFSGFVPET 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3569 552 PANTHER PECTINESTERASE 14 538 - -
Glsi02g3569 552 Pfam Plant invertase/pectin methylesterase inhibitor 37 154 IPR006501 GO:0004857
Glsi02g3569 552 SUPERFAMILY Pectin lyase-like 232 546 IPR011050 -
Glsi02g3569 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 183 IPR035513 -
Glsi02g3569 552 SMART PMEI_2 30 178 IPR006501 GO:0004857
Glsi02g3569 552 FunFam Pectinesterase 4 231 548 - -
Glsi02g3569 552 CDD PMEI-like_3 37 184 - -
Glsi02g3569 552 Gene3D - 231 550 IPR012334 -
Glsi02g3569 552 Pfam Pectinesterase 233 534 IPR000070 GO:0030599|GO:0042545
Glsi02g3569 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3569 Glsi-ChrGlsi02 82686113 82687841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3569 6 549 Carbohydrate Esterase AT3G05610 33.805 2.28e-94 300