Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3550 ATGGTGAACATTTGGTGGGTTGGCATTGTAATAGGGCTTGTTTTTAGTAGCTGGGTTAATGGGTTTGCAGACTATCATTTCAATGAAACAGAGCTGTCTTTTTTGGAGGCTCATGAAGCATCCTTGGCTGGGAGTAATCTGCTGCTGGTAGGGCTAACCCTCATTCAAGGTGCTGGTGCTAAAGGAGCAGTCTGCTTGGATGGAACACTGCCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGCTCATAAATTTAGAGGGAGGTGGTTGGTGTAATAACATTAGAGCATGTGTTTATCGCAAGAAAACAAGGCGTGGATCATCATCATTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGCAATAATGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAGCTTCGTTATTGTGATGGTGCCTCTTTTACTGGGGATAGTGAAGATAAGACTTCACAACTGCAATTCAGAGGACAACGTATTTGGTTGGCAGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTATGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCCGGTGGTCTCGCTGCTGTTGTACACTGTGATGAATTCCATGGTCTATTTCCAAGGACTACCAAAGTGAAGTGTCTGAGTGATGCTGGGCTATTTCTTGATGTGGCTGACGTATCCGGTGGCCATACCCTCAGGAATATATACAGTGGTGTTGTAGGGTTGCAGGGGGTGCTGAAGAGTCTTCCACGTGTTTGTACCAACCACCTTGATCCCACTTCGTGCTTTTTCCCTCAGAACTTGATCGCCAGTGTTAGAACCCCGCTATTCATTCTCAATGCTGCCTATGATTCATGGCAGATCCAGTCCAGCATAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATTATTGCAGACTAGACCATGCTAAATGTACTAGAACACAAATCCAGTATCTGCAAGGATTCAGGAATAAAATGCTGAATGCCATTAGAGACTTCTCAAGATCAAATCAGAACGGGCTGTTTATAAATTCCTGTTTTTCTCACTGCCAGACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAATAAGGCAATTGCTGTGGCTGTTGGAGATTGGTATTTCGACCGAGCAGGTGTTAAGGCTATAGACTGTGCTTACCCTTGCGATAAGACATGCCACCATCTGGTATTTGTTTTTTCTTCTGTTGCTGTGCTGCATATAACTGAGGATTTACATTCTCCGGAGTGA 1293 0.4447 MVNIWWVGIVIGLVFSSWVNGFADYHFNETELSFLEAHEASLAGSNLLLVGLTLIQGAGAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRACVYRKKTRRGSSSFMEKEIPFTGILSNNAEQNPDFFNWNRVKLRYCDGASFTGDSEDKTSQLQFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLAAVVHCDEFHGLFPRTTKVKCLSDAGLFLDVADVSGGHTLRNIYSGVVGLQGVLKSLPRVCTNHLDPTSCFFPQNLIASVRTPLFILNAAYDSWQIQSSIAPPSADPHGYWHYCRLDHAKCTRTQIQYLQGFRNKMLNAIRDFSRSNQNGLFINSCFSHCQTERQDTWFADNSPVIGNKAIAVAVGDWYFDRAGVKAIDCAYPCDKTCHHLVFVFSSVAVLHITEDLHSPE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3550 430 PANTHER NOTUM-RELATED 48 409 IPR004963 GO:0016787
Glsi02g3550 430 Pfam Pectinacetylesterase 48 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3550 Glsi-ChrGlsi02 82454157 82458643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3550 1 412 Carbohydrate Esterase AT1G57590 66.110 0.0 594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3550 02 82454157 82458643 Glsi11g0357 11 2298222 2302619 ECH
Glsi02g3550 02 82454157 82458643 Glsi02g3550 02 82454157 82458643 ECH
Glsi11g0357 11 2298222 2302619 Glsi02g3550 02 82454157 82458643 ECH