Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3534 ATGGCTTCAACTCTGCTGCCTCTGGTGACTTTGTTTTTAGCTTTCTCCGCCTTTTCTTTGCAGGTCATTGAGGCAGAAACAGAACAAGTTCATAGTTTCAAGCTTAATTCTCGTATTCTTCAGGAGTCTATCATTAAACAGATTAATGAAAACCCAAAGGCAGGATGGGAGGCTGCTTTGAATCCTCGTTTCTCTAATTATACAGTTGGACAATTTAAGCGCCTTCTAGGAGTTAAACCAACACCTAGAAAGGAACTGGGAAGTACTCCTGTCAAAACTCATCCAAGGTCATTAAAATTGCCAAATAAATTCGACGCAAGAACAGCTTGGTCGCAGTGTAGCACTATTGGAAGAATTCTAGTGCTGACTCTTGGTCACTGTGGTTCCTGTTGGGCTTTTGGTGCTGTTGAATCATTATCAGATCGTTTTTGCATTCATTTTGGCACGAATTTATCACTCTCTGTTAATGACCTCCTCGCATGCTGTGGATTTTTGTGTGGATCTGGCTGTGATGGGGGGTATCCCCTCTATGCATGGCGATATCTTGTCCATCATGGTGTTGTCACTGAAGAGTGTGACCCGTACTTTGATGAGATTGGTTGTTCTCACCCTGGCTGTGAGCCTGCATATCCAACACCCCGGTGTGTTAGAAAGTGTGTCAATGGTAACCAGCTTTGGAGGGACTCAAAGCACTATAGTGTTAATGCATATAGGATCAACTCTGATCCCTATGATATCATGGCGGAAGTTTATAAGAATGGGCCAGTTGAGGTCTCGTTCACTGTTTTTGAGGATTTTGCTCACTACAAATCAGGAGTTTACAAACACATCACAGGTTACGAAATGGGAGGTCATGCTGTAAAGCTCATTGGGTGGGGAACCACCAATGATGGAGAGGACTATTGGCTTCTTGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGTTACTTCATGATCAGAAGAGGAACAAACGAATGTGGTATTGAAGAAGAAGTTGTCGCCGGTTTGCCTTCCACCAAAAATCTCGTAATAGAGGTAGCTGATGTGGACGCCGATGCTGCTGTTTCATTCTGA 1077 0.4355 MASTLLPLVTLFLAFSAFSLQVIEAETEQVHSFKLNSRILQESIIKQINENPKAGWEAALNPRFSNYTVGQFKRLLGVKPTPRKELGSTPVKTHPRSLKLPNKFDARTAWSQCSTIGRILVLTLGHCGSCWAFGAVESLSDRFCIHFGTNLSLSVNDLLACCGFLCGSGCDGGYPLYAWRYLVHHGVVTEECDPYFDEIGCSHPGCEPAYPTPRCVRKCVNGNQLWRDSKHYSVNAYRINSDPYDIMAEVYKNGPVEVSFTVFEDFAHYKSGVYKHITGYEMGGHAVKLIGWGTTNDGEDYWLLANQWNRSWGDDGYFMIRRGTNECGIEEEVVAGLPSTKNLVIEVADVDADAAVSF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3534 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Glsi02g3534 358 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Glsi02g3534 358 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Glsi02g3534 358 PRINTS Papain cysteine protease (C1) family signature 124 139 IPR000668 GO:0006508|GO:0008234
Glsi02g3534 358 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 46 330 IPR013128 GO:0008234
Glsi02g3534 358 FunFam cathepsin B-like protease 2 33 343 - -
Glsi02g3534 358 Pfam Papain family cysteine protease 100 336 IPR000668 GO:0006508|GO:0008234
Glsi02g3534 358 CDD Peptidase_C1A_CathepsinB 101 336 - -
Glsi02g3534 358 Pfam Peptidase family C1 propeptide 40 82 IPR012599 GO:0004197|GO:0050790
Glsi02g3534 358 SUPERFAMILY Cysteine proteinases 44 338 IPR038765 -
Glsi02g3534 358 SMART pept_c1 100 337 IPR000668 GO:0006508|GO:0008234
Glsi02g3534 358 Gene3D Cysteine proteinases 29 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3534 Glsi-ChrGlsi02 82346748 82352614 Dispersed/Wgd