Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3533 ATGTCGATAGCGAAAGAGCCGGAGCAAGTGATGAAGTTGAGGGGAGGATCGGTGCTGGGAAAGAAGACCATTCTGAAGAGTGACCATTTTCCTGGTTGCCAGAACAAACGCTTGTCTCCCCAGATCGAAGGCGCTCCCAATTATCGTCAGGCTGACTCATTACATGTTCACGGCGTTGCAATCCCAACAATTGATGGGATCCGAAATGTTCTCAAGCATATTGGCGCACAAATAGAAGGGAAGAGAGCACAAGTTCTTTGGATTAACCTTCGTGAGGAACCGGTTGTGTACATTAATGGACGCCCCTTTGTTTTGCGTGATGTTGAGAGACCATTCTCCAACCTTGAGTATACGGGAATTAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGATATCCTTATGGAAGCCGCAAGATATGGAAATAAGATCCTTGTGACTGATGAACTGCCAGATGGCCAGATGGTGGACCAATGGGAACCAGTGTCATGTATTTCTGTCAAAACACCACTAGAGGGGTATGAGGAATTGCAAGCGGAGGGATACCTTGTTGATTATGAGCGTGTTCCTATAACTGATGAAAAATCACCAAAAGAACTGGATTTTGATTTTTTGGTTCATAAGATTTCTCAAGCTGATGTAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACTGGAATGGTCATTGCAACTTTAGTTTACCTCAACCGAATTGAAGCTTCTGGCATTCCAAGAAGCAATTCAGTTGGTAGAATTTCTCAGTATGACACCAATGTTGCTGACCATTTGCCTAACTCAGAAGAGGCAGTTCGCAGGGGAGAATATGCAGTCATAAGAAGCTTGATTCGGGTATTAGAGGGCGGTGTTGAGGGCAAAACACAAGTGGACAAAGTTATTGACAAGTGTGCCTCAATGCAGAATTTGCGTGAAGCTATTGCCACCTATCGCAATAGCATTCTGCGACAACCAGATGAGAAGAAAAGAGAGGCATCACTTTCATTTTTTGTGGAGTACTTGGAGAGATACTACTTTTTAATATGTTTTGCTGTATACATTCATTCAGAAAGGGATGCACTCCGTTCTAGTTTTGTTGGTCACAGTAGTTTTGCTGGCTGGATGAGAGCTAGGCCAGAACTGTACAGTATTATTCGCAGGTTGCTCAGGAGAGATCCAATGGGTGCACTTGGATATTCCAGTTTGAAGCCTTCTCTAAAGAAGATAGCGGAATCTACTGATGGCCACCCTTCTGAGATGGGTAAGATGGGTGTGGTTGCTGCCTTAAGAAATGGTGAAGTTCTTGGTAGTCAAACTGTTCTAAAAAGTGATCACTGTCCCGGTTGTCAAAACCCAAGTTTACCTGAAAGAGTGGAGGGGGCGCCTAATTTCAGAGAAGTTCCTGGGTTTCCGGTTTATGGGGTGGCAAACCCAACCATTGATGGTATCAGATCTGTCATTCGTAGGATTGGTAGCTCTAAAGGTGGACGCCCAGTACTTTGGCATAATATGAGAGAAGAACCTGTTATTTACATCAATGGGAAACCATTTGTTCTCCGTGAAGTTGAAAGACCATACAAAAACATGCTGGAGTACACGGGAATTGACCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTAAAACAAGATATCTTACGGGAAGCTAAACACTATGGCAGTGCTGTATTGGTTATTCATGAAACAGACGACGGGCAGATATGTGATGCTTGGGAGCATGTCACCCCTCATGCGATCCAAACCCCACTTGAAGTTTTCAAAAGCCTGGAGGCTGATGGTTTTCCCATTAAGTATGCACGGGTGCCCATCACTGATGGTAAAGCTCCAAAAAGTTCTGGCTTTGACTCAATGGCAGTTAATATTGCATCTTCTCCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGTAGGGGTAGGACAACCACTGGTACCATCCTAGCTTGCCTTGTTAAACTTCGAATTGATTATGGGAGACCCATCAAAATCCTGGGTGATGATGTGACCTGTGAAGTAGTGAATAATGGTTACTCAAGTGGACATAAAACTAGGGCATATCTTGGAAGTGAAGCATTTGATGGTTTTTGTGGACAAGGAAAATCCAAAATGACATTTAAGAATTGGTTGCATCAGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTGAGACCGGGTCGATTTTTCACTGTCCCAGAGGAGTTGAGAGCACCACAAGAGTCTCAGCATGGAGATGCAGTAATGGAAGCAGTTGTCAAGGGCCGGAATGGTTCTGTTTTGGGGAAAGGCTCCATACTAAAAATATATTTCTTTCCTGGTCAGAGAACTTCCAGCCACGTACAGATACATGGTGCACCACTTGTTTACAAGGTTGATGAATATTCTGTGTATAGCATGGCAACTCCAACCATCTCTGGTGCCAAAGAGATGCTAGCATGTTTAGATGCTAAGCCTAAAGCACCTTCAGAAGCTACAGTTGCTCAAAAAGTTATATTGACTGATCTGAGAGAGGAAGCAGTTGTTTATATCAATGGAACTCCCTTTGTCTGGAGGGAGTTAAACAAACCTGTTGATACACTCAAGCATGTGGGAATCACTGGTCCTGTGGTAGAGCATGTGGAGGCACGACTAAAAGAAGATATAATAGCTGAAGTTAGACAATCAGGTGGGCGAATGCTATTACATCGTGAAGAGTATAACCCTTCAACAAATCAGTCTGGTGTTGTTGGATACTGGGAAAACATTTCGGCAGATGATGTCAAGACACCTGCAGACGTTTATTCATCTCTGAAAAAAGAGGGATATGGTATTGTTTATCGAAGGATTCCATTAACAAGAGAAAGAGATGCCTTAGTCTCTGACATAGATGCAATTCAGTATTGTAAAGATGACTCTGCAGGGAGTTATCTTTTCGTATCACACACAGGTTTTGGTGGAGTTGCATATGCTATGGCGATCATCTGTATTAGACTTGGTGGAGTGACAAACTTGGCAACTAAAATCCCACAACAATTGTTTGGTTCTCTTATATCTCCAGCAGCCGAAAATAACATTCCCTCTCGAGCTTCTAATGAAGAAGCACTTAGGATGGGTGACTACTGTGACATATTAAGCCTAACAAGAGTCCTTATACATGGCCCTCAAAGCAAAGCAGATGTTGACGTTATTATTGAAAGATGTGCAGGCGCAGGGCATCTGCGAGATGATATTCTTTATTATAGTAAAGAATATGAGAAGTTTACTGATGGTGATGACGAGGAACGTGCTTATCTTTTGGACATGGGCATCAAGGCTTTGAGGCGGTATTTTTTCCTTATCACATTCAGATCCTATCTTTATTGCACCTCTCCTGCCAAGATGGAATTTACTACATGGATGGATGCAAGACCCGAACTTGGTTATCTATGTAACAATCTCAGAATTGATAAATAA 3474 0.428 MSIAKEPEQVMKLRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTIDGIRNVLKHIGAQIEGKRAQVLWINLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILMEAARYGNKILVTDELPDGQMVDQWEPVSCISVKTPLEGYEELQAEGYLVDYERVPITDEKSPKELDFDFLVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIEASGIPRSNSVGRISQYDTNVADHLPNSEEAVRRGEYAVIRSLIRVLEGGVEGKTQVDKVIDKCASMQNLREAIATYRNSILRQPDEKKREASLSFFVEYLERYYFLICFAVYIHSERDALRSSFVGHSSFAGWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKKIAESTDGHPSEMGKMGVVAALRNGEVLGSQTVLKSDHCPGCQNPSLPERVEGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPVLWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKQDILREAKHYGSAVLVIHETDDGQICDAWEHVTPHAIQTPLEVFKSLEADGFPIKYARVPITDGKAPKSSGFDSMAVNIASSPKDTAFVFNCQMGRGRTTTGTILACLVKLRIDYGRPIKILGDDVTCEVVNNGYSSGHKTRAYLGSEAFDGFCGQGKSKMTFKNWLHQRPEVQAMKWSIRLRPGRFFTVPEELRAPQESQHGDAVMEAVVKGRNGSVLGKGSILKIYFFPGQRTSSHVQIHGAPLVYKVDEYSVYSMATPTISGAKEMLACLDAKPKAPSEATVAQKVILTDLREEAVVYINGTPFVWRELNKPVDTLKHVGITGPVVEHVEARLKEDIIAEVRQSGGRMLLHREEYNPSTNQSGVVGYWENISADDVKTPADVYSSLKKEGYGIVYRRIPLTRERDALVSDIDAIQYCKDDSAGSYLFVSHTGFGGVAYAMAIICIRLGGVTNLATKIPQQLFGSLISPAAENNIPSRASNEEALRMGDYCDILSLTRVLIHGPQSKADVDVIIERCAGAGHLRDDILYYSKEYEKFTDGDDEERAYLLDMGIKALRRYFFLITFRSYLYCTSPAKMEFTTWMDARPELGYLCNNLRIDK 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3533 1157 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 247 IPR029021 -
Glsi02g3533 1157 FunFam Paladin isoform B 781 1031 - -
Glsi02g3533 1157 FunFam Paladin isoform A 447 679 - -
Glsi02g3533 1157 SMART PTPlike_phytase_2 88 243 - -
Glsi02g3533 1157 SMART PTPlike_phytase_2 509 665 - -
Glsi02g3533 1157 SMART PTPlike_phytase_2 847 1005 - -
Glsi02g3533 1157 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 424 1075 - -
Glsi02g3533 1157 CDD PTP_paladin 14 311 - -
Glsi02g3533 1157 CDD PTP_paladin 437 681 - -
Glsi02g3533 1157 FunFam Paladin isoform A 24 267 - -
Glsi02g3533 1157 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 427 666 IPR029021 -
Glsi02g3533 1157 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 763 1008 IPR029021 -
Glsi02g3533 1157 Pfam Inositol hexakisphosphate 88 242 - -
Glsi02g3533 1157 Pfam Inositol hexakisphosphate 509 665 - -
Glsi02g3533 1157 Pfam Inositol hexakisphosphate 848 1003 - -
Glsi02g3533 1157 Gene3D Protein tyrosine phosphatase superfamily 784 1017 IPR029021 -
Glsi02g3533 1157 Gene3D Protein tyrosine phosphatase superfamily 23 288 IPR029021 -
Glsi02g3533 1157 Gene3D Protein tyrosine phosphatase superfamily 447 725 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3533 Glsi-ChrGlsi02 82333074 82344665 Dispersed/Wgd