Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3525 ATGATTACAAGTGGGAATGGTTGGGAGCACAAAGAAGGAGGCGTAGTCGCAGGCATTATCCATATGATTGCAGCTTCCAACTTGCAAGTCAAACATGGGACGCCGTCGACGGCCGTTACATTTTCGTCTTCCTATTTTTTGGCTACAGAGTTGGCTGTCTTGTTTATATCTGTATTTGCTGATGGTGCTCAGTTACAGAAACCGTATATCAGCTTCTCCGAATCAGGGGCATTTGCAATAATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTAGTGCCATTTAACGGGAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGATTAGGCCATTCTTTCTGTTATGTGAGGCCTTCAATTTTTGAATCTCCTGCCATTACCCCATCAAACTCTGAGAGGTTTACAGTTGATTCAAGTACCCTTGATTCTGAAACGTTAAGTGGATCGTTTAGGAATGACAGTATAGAAGATTCCTCCGGCATACACAAACCAGGCAAATGCTTCCCAGAAACCACATTCAAAACAATTTCAGGGGCTTCAGTCAGTGCCAATGTCTCAACCGCAAGGACTGGTAACCAGAGTGCATTATTTGCTAGTGACGTCCAAGAGCCAGCAGCATCATTTGAGGGAACTTCCTCATTTGCTGCAATCCCTTTGCAACCTGTTCCCCGTGGTTCTGGACCTTTGAACGGTTTCATGTCTGGACCTCTTGAGAGAAGCTTTGCTTCAGGTCCATTGGATAGGGGTGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCTGCGCCGCTTGCACGAGGACGTCGAAGGCAACGCCTCCAGCATCTCATGAGAAGTGTGAGTGGACCAATGAAAAACACTTTTTCTCGGACCTTTTCTAAGCATTCTATGGGTGGCAGTTGGATGCAGCGGTTTTTCTTTCATCCAGTAACCCAATTGGCCTGGCATTCCAAAGGCACAAAGTTTCGTCAAGAAGTTTCTAGAAACTGTATTGAAGTTGGACCATCTGAAGGGGAGTATAAAAATACACACAATTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGATGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCTCCTGATTTTTTGATGAGCCATCTTTATAGATTTGTAGACAAGGAAATGGAAGGATTACTTTGGGATTATGAAGATAATCCTGTAGATCCGCTTCAACCTGAATTCCCTAATGCTGGAAATGCTGTGGTTGCTCCAGAGTGCAGCAGGGAGGAACTCTCAGATAATCATCCTAATTCAAATCAAGAAAGTTCATGTTGTTTAGAAGCTTCTTCTGGTCCAGAAAATGCCAAGGATCGATCAACTGGCTCTGAGATAGTTGAGGACAATGTTGAATTCAAGGTGGATGTTGAAGACCAATTACCTAATTCTAGAATTCCCAGTAATTCAGGTAATGTTCCTGCTTCTGTTCCACTCGGACAGTTGACTGGTCAAGGTAAAAAAAGTGTGCGGCTTTATGAACTACTTCAAATGGAATCTTGGGATGAACAGGGTTTCTTGTCAATCTCAGAACAAGGTAAGGATTCTTCAGTTCCAAGGGAATCAACACAAGCAAGGCAGATGAGATCTTGTTCATTGAATGCAAAAGAAGATAGTTCTAGACATCAAGATGAAGGTCCCACTACATCAGGAGAAAACGCAGGGGTTGGGTTCGAATTGATTAATCTAGAGCCTTTAGCTGGTTTTTCTGTTTCAGGACAACAGAATACCAGAAAGTCATTTCTTGGTACTAAAATTAGAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACATGTGTTGATGAGAAAATGTTTGAAGCCTTAGGACCCATTAGAAAATGCAAATCTGGAGTAGTTGATCATAATGCAGTGTTAAGAGCAATGGCTCGAGCTCTTGATAGGACAGAAGAGGCATACATGGAAATGGTGGAGAATAATCTGGAAAAAAATCCTGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGTTGATGAAAGACCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGTAATTTTAGCTCAAGAAAGACCAAATGATCGTCATCCTAATTTAAGTTTTGTTAAAGATGACGTGAGGCATAGAAATCGATCTAGAGAGTCATTAGTACGTATGGAGCTGGATAGAATATCAGAGGAGTCCCCAATTCACACTCAAAACAGCCATATTAACAAGATGAACAAAAATAGAGATGTATCCATTTGCAGATTAAAAATGAGAGCTGTTCAGCTTTCCACAGACCACAGCACGAGTATTGAAGAGGAAGTTCTTAGAATAAGGTCGGAACACCCTGATGATAATCAAGCCATATACAATGATCGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGCATCTTTTAATGAAGTTCTACTGGAGATGTTTCGAGTTGATTATGTGGGCACTGCTCCTTACCTAAGTTGTGCACCTTCGGTTCTTCATCATCGACTTTGTTCAAGTGATAGGTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATACTTCAGCAACGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCTGAAGGTGATCCTGCACAATACTTGATTGCAGAACTTCTCTTCCGTGCTGCCAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATCGACGTAAATATCATGATGATGTTTCTGTTATGGTGGTTTCCCTCGAGGGAAGGATTTGGAGATCATCTGGATAA 2943 0.4213 MITSGNGWEHKEGGVVAGIIHMIAASNLQVKHGTPSTAVTFSSSYFLATELAVLFISVFADGAQLQKPYISFSESGAFAIMGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRNDSIEDSSGIHKPGKCFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERSFASGPLDRGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRQRLQHLMRSVSGPMKNTFSRTFSKHSMGGSWMQRFFFHPVTQLAWHSKGTKFRQEVSRNCIEVGPSEGEYKNTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFVDKEMEGLLWDYEDNPVDPLQPEFPNAGNAVVAPECSREELSDNHPNSNQESSCCLEASSGPENAKDRSTGSEIVEDNVEFKVDVEDQLPNSRIPSNSGNVPASVPLGQLTGQGKKSVRLYELLQMESWDEQGFLSISEQGKDSSVPRESTQARQMRSCSLNAKEDSSRHQDEGPTTSGENAGVGFELINLEPLAGFSVSGQQNTRKSFLGTKIRKMYRKQKSLRKKLFPWSYDWHREETCVDEKMFEALGPIRKCKSGVVDHNAVLRAMARALDRTEEAYMEMVENNLEKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNLSFVKDDVRHRNRSRESLVRMELDRISEESPIHTQNSHINKMNKNRDVSICRLKMRAVQLSTDHSTSIEEEVLRIRSEHPDDNQAIYNDRVKGQLKVTRAFGAGFLKRASFNEVLLEMFRVDYVGTAPYLSCAPSVLHHRLCSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3525 980 MobiDBLite consensus disorder prediction 549 593 - -
Glsi02g3525 980 MobiDBLite consensus disorder prediction 549 573 - -
Glsi02g3525 980 Gene3D - 611 977 IPR036457 -
Glsi02g3525 980 FunFam Protein phosphatase 2C 32 334 504 - -
Glsi02g3525 980 MobiDBLite consensus disorder prediction 501 521 - -
Glsi02g3525 980 Gene3D - 335 501 IPR036457 -
Glsi02g3525 980 PANTHER PROTEIN PHOSPHATASE 2C 359 970 IPR015655 GO:0004722|GO:0006470
Glsi02g3525 980 MobiDBLite consensus disorder prediction 457 478 - -
Glsi02g3525 980 Coils Coil 678 698 - -
Glsi02g3525 980 ProSiteProfiles PPM-type phosphatase domain profile. 357 971 IPR001932 -
Glsi02g3525 980 MobiDBLite consensus disorder prediction 447 521 - -
Glsi02g3525 980 SUPERFAMILY PP2C-like 370 972 IPR036457 -
Glsi02g3525 980 Pfam Protein phosphatase 2C 796 942 IPR001932 -
Glsi02g3525 980 MobiDBLite consensus disorder prediction 480 498 - -
Glsi02g3525 980 CDD PP2Cc 677 971 IPR001932 -
Glsi02g3525 980 SMART PP2C_4 357 969 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3525 Glsi-ChrGlsi02 82254553 82261675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3525 81 980 PP2C-type Phosphatase Gene Family AT2G46920 64.945 0.0 1133