Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3519 ATGACAATGAACCTGAGTCTGATATTCCTTGGTTTTGTTTGCTATGTTTCTGGGTTTATCTCCGGTGGATCTGAGAGAGAATCCGTGCTTTCTTACTTAGAAAACGATGTCATCGCCGCAAAGTCTCCTTCCTCGCCCCAACCTCTCATGGTCGAACTCACTCTTATCGAAGGAGCTGCCGCTAAAGGGGCCGTCTGTTTGGATGGAACACTGCCTGGTTACCATTTGGATCGTGGATTTGGAGCTGGTGCAAATAGCTGGCTCATTCAATTGGAGGGAGGAGGGTGGTGTAACAGCATCAGGAATTGCGTTTATAGAAAAACTACTCGTCGCGGTTCCTCAAACTACATGGAAAAGCAAATACCATTCACAGGAATACTGAGCAATAAAGCTGAAGAAAACCCTGATTTTTTCAACTGGAACAGAGTCAAATTACGTTACTGTGATGGAGCGTCTTTCAGTGGAGACAGTCAGAACGAGGCTGCGCAGCTTCAATTTCGAGGACAAAAAATATGGCTTGCTGCTATGGAGGAGTTAATGTCAAAGGGAATGCAGAACGCCAACCAGGCTCTTCTCTCTGGATGCTCTGCTGGTGGTCTCGCATCCATAATACATTGTGATGAGTTCCGGGGAATGTTTACGTTACCTACCAAAGTGAAATGTTTGAGTGACGCCGGATTTTTTCTTGATGCAACTGATGTATCTGGGGGGCACACTCTGAGGAATCTGTTTGCAGGTGTAGTTCAATTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTCGACCAACTAGATCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTCCAACACGTCGAGACTCCTTTGTTTCTACTCAATGCAGCCTACGATGCATGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGATCCATATGGCTCTTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTCATCTCAACTTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTCAATGCCGTGGAAGAGTTCTCAAAGTCAGCTCAAACTGGATTATTCATAAACTCCTGTTTTGCTCATTGCCAGTCTGAGAGACAAGGAACATGGCTATCTGATGACTCTCCCCTTCTTATGAATAAGCCAATTGCAATTGCTGTTGGAGACTGGTATTTCGATCGAGACGATATCAAAGCTATTGACTGTGCTTACCCCTGTGACAAAACCTGCCATAATATTGTCTTCAACTGA 1245 0.4474 MTMNLSLIFLGFVCYVSGFISGGSERESVLSYLENDVIAAKSPSSPQPLMVELTLIEGAAAKGAVCLDGTLPGYHLDRGFGAGANSWLIQLEGGGWCNSIRNCVYRKTTRRGSSNYMEKQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDEFRGMFTLPTKVKCLSDAGFFLDATDVSGGHTLRNLFAGVVQLQEVQKNLPKSCLDQLDPTSCFFPQNLVQHVETPLFLLNAAYDAWQVQASLAPPSADPYGSWNDCKSNHANCSSSQLQFLQDFRNQMLNAVEEFSKSAQTGLFINSCFAHCQSERQGTWLSDDSPLLMNKPIAIAVGDWYFDRDDIKAIDCAYPCDKTCHNIVFN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3519 414 PANTHER NOTUM-RELATED 49 410 IPR004963 GO:0016787
Glsi02g3519 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3519 Glsi-ChrGlsi02 82222785 82225735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3519 8 414 Carbohydrate Esterase AT3G62060 65.865 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3519 02 82222785 82225735 Glsi11g0357 11 2298222 2302619 CCT