Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3511 ATGAATGCTTCAAGAGGATTTCAAGGAAGTGCATCAATGATGTTTCTTGGTATAGAGAAGTATCTGAGGCCTCACTGGTGGCGGCTTGGTCTGTCATCTTGTTCTTCCACAATGGGCAAAGCCTCTAGCTCTTCCTCTTCCTCTATCAGCAGCAGTAATCACCCACTTATCTCAACTGCATCCTCTCTCACACACCTCAACGCAGACCTTCCTACAGATCTCAGGCTTGGATTAAGCATTTCAGCCACTCAGCATGTTGGCTCTTCTATTTCAAGGGGGCAACCATCAGAGTGGACACCATGGACACCGATCCAGAGTTCCCAAGCTGGTGAAGTAAATGATTGCAGCGATCATAGCAGCTTCTTTGTGAAGGTGTACATGGAAGGCATTCCAATTGGCAGAAAACTGAATCTGGTAGCTCATGATGGCTACCATGAATTAGTAAAGACTCTTGAACACATGTTTGACACCACCATTCTCTGGGGGAGTGGGATGGACGGGGTCCAACCAGAGAGGTGCCATGTGCTGACTTACGAAGACGAAGAAGGGGACTTGATCATGGTTGGGGATGATGTTCCTGTCTACGGTGAAGAGATTGAAGATTACGAGGGTAGACACATTCGGGTGTTGACACTGCAGTCTCTTCGTCCTGCGGTTTCCAATTTTGTCCTGTAG 675 0.477 MNASRGFQGSASMMFLGIEKYLRPHWWRLGLSSCSSTMGKASSSSSSSISSSNHPLISTASSLTHLNADLPTDLRLGLSISATQHVGSSISRGQPSEWTPWTPIQSSQAGEVNDCSDHSSFFVKVYMEGIPIGRKLNLVAHDGYHELVKTLEHMFDTTILWGSGMDGVQPERCHVLTYEDEEGDLIMVGDDVPVYGEEIEDYEGRHIRVLTLQSLRPAVSNFVL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3511 224 Pfam AUX/IAA family 111 193 IPR033389 -
Glsi02g3511 224 SUPERFAMILY CAD & PB1 domains 116 194 - -
Glsi02g3511 224 Gene3D - 114 199 - -
Glsi02g3511 224 ProSiteProfiles PB1 domain profile. 120 214 IPR000270 GO:0005515
Glsi02g3511 224 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 71 194 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3511 Glsi-ChrGlsi02 82154939 82157809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3511 88 191 B3 DNA Binding Superfamily AT4G23980 32.692 3.96e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi02g3511 AUX_IAA 1.5e-16 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3511 02 82154939 82157809 Glsi11g0368 11 2350992 2351850 CCT