Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3510 ATGGCATTCTCATTCTCCTCTACCTTGTTACTTTGCTATATTTACTTTGTATCTCTTACGGCTGAGGCACGAGGCTCTCCCATTATACCCATCTCTTCTCTCGTTCCCAAAAAGCTTTTTGATACCATTTTCCTACACAAGGATGACAGTGCATGCCCTGCCAAAGACTTCTACCCCTACGATTCCTTCATTCTTGCAACAAAATGCTTCCCTGGATTTGGTACTACCGGAAGTTTAAGCACTCGCAAGCGTGAGATTGCTGCATTTCTTGCTCAAATCTCCCATGAGACCACAGGTGGGTGGCCTACTGCACCCGATGGACCATATGCTTGGGGCTTGTGCTTCAAGGAAGAAATCAATCCTCAGAGTAACTACTGTGATTCCACCAACAAAGAATGGCCCTGTTACCCAGGCAAAACTTACCAAGGCAGAGGACCCATTCAACTTTCTTGGAACTTCAACTATGGCCCGGCTGGGAAGGCTTTGGGATTTGATGGACTGAAGAACCCGGATATTGTTTCAAACAACTCTTTGATTGCATTTAAAACAGCTCTGTGGTTTTGGATGACAGAACGAAAGCCAAAACCTTCTTGCCACAATGTGATGGTTGGGAAATATGTGCCTTCAAAAGCTGACATAGCAGCTAACCGAACTGCTGGATATGGCTTGGTCACTAACATAATCAATGGTGGATTGGAATGTGGAATTCGTAATGATGCCAGAGTGAATGATCGGATTGGGTACTTTGAAAGATATGCCAAATTGTTTAACGTAGAAACAGGTCCGAACCTGGATTGTGCATCTCAGAAATCCTTCTAA 819 0.4432 MAFSFSSTLLLCYIYFVSLTAEARGSPIIPISSLVPKKLFDTIFLHKDDSACPAKDFYPYDSFILATKCFPGFGTTGSLSTRKREIAAFLAQISHETTGGWPTAPDGPYAWGLCFKEEINPQSNYCDSTNKEWPCYPGKTYQGRGPIQLSWNFNYGPAGKALGFDGLKNPDIVSNNSLIAFKTALWFWMTERKPKPSCHNVMVGKYVPSKADIAANRTAGYGLVTNIINGGLECGIRNDARVNDRIGYFERYAKLFNVETGPNLDCASQKSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3510 272 Pfam Chitinase class I 35 266 IPR000726 GO:0004568|GO:0006032|GO:0016998
Glsi02g3510 272 SUPERFAMILY Lysozyme-like 31 272 IPR023346 -
Glsi02g3510 272 Gene3D - 38 272 - -
Glsi02g3510 272 Gene3D Endochitinase, domain 2 117 175 - -
Glsi02g3510 272 FunFam Endochitinase (Chitinase) 117 175 - -
Glsi02g3510 272 PANTHER CHITINASE-RELATED 30 270 - -
Glsi02g3510 272 ProSitePatterns Chitinases family 19 signature 2. 179 189 IPR000726 GO:0004568|GO:0006032|GO:0016998
Glsi02g3510 272 CDD chitinase_GH19 35 266 - -
Glsi02g3510 272 PIRSF Endochitinase 12 272 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3510 Glsi-ChrGlsi02 82152522 82153424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3510 30 272 Glycoside Hydrolase AT4G01700 74.074 7.16e-146 408