Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3497 ATGGAGGACGAGACTTTTCTTTCCTCCCAAACAAGGTCCCAATTGGAACCCATTATTGAGCATCGTGTTCCTGATTTATCCTTCGCTAGTTCTCGTTCCTTCAATGACCTTATCATTTTTCAGGAAGCCCAACGAGACCCGCAATCCTCATCTCAATTATTGGCTAAGAATGCCCCCAAGAAGAAACTGGGTCGCTGCAAGACTGCCCCTGCCATGGTTATCCTGCGGGACCTCAGACCAAAGGCACCCGATATTCCCAAACCACAGTCTAGCTCCATCATCAGGCAAGGCATTTGCTTGCTTGTGGTTTATCTTTCTGTTGGGGTCGTCATATATTCGTTCAACAGGGATCATTTTTCCGGCGCAGAGACTCACCCGGTAGTTGATGCGCTTTACTTCTGTATAGTCACCATGTGTACAATAGGTTACGGAGACATCGCTCCTCTAACGCCAGTAACCAAGGTGTTTGCTTGTATTTTCGTATTGGTAGGATTTGGATTCATAGACATATTGCTTAGTGGGCTTGTCAATTACGTTCTAGATTTGCAAGAGAACATGATCCTAACCGGGTTTCAAATGGGTATTCGAAGATCTCAAGAAGGGTTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGACGGATGAGAATCAGATTGAAGGTTGGTTTGGCACTTGGTGTGGTGGTGTTGTGTATTGGAATAGGGAGTTTGATTTTGTACTTTGTGGAGGACTTGAATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACAACAGTTGGGTACGGGGATAGAGCCTTCAAGACCCTTCCAGGGAGGCTCTTTGCGGCTATTTGGCTCCTTGTTTCCACATTGATGGTGGCCCGGGCGTTCCTGTATTTGGCAGAGGCCAGAATTGATAGAAGGCACCGGAGATTAGCCAAGTCGGTGTTGCATAGAGATATAACTGTTGAGGATTTGCTTGCTGCAGATATCAATCACACTGGTTTCATTAGTAAGTCTGAGTATGTAATCTTCAAGCTCAAAGAGATGGGGAAGATACGGGAGAAAGATATATTGCAAATCTGTGATCAATTCAGCAAGCTCGATCCTACCAACTGTGGGAAGATAACGCTACCTCATCTGTTGGAGGACCGGTCATGA 1149 0.4508 MEDETFLSSQTRSQLEPIIEHRVPDLSFASSRSFNDLIIFQEAQRDPQSSSQLLAKNAPKKKLGRCKTAPAMVILRDLRPKAPDIPKPQSSSIIRQGICLLVVYLSVGVVIYSFNRDHFSGAETHPVVDALYFCIVTMCTIGYGDIAPLTPVTKVFACIFVLVGFGFIDILLSGLVNYVLDLQENMILTGFQMGIRRSQEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLILYFVEDLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDRRHRRLAKSVLHRDITVEDLLAADINHTGFISKSEYVIFKLKEMGKIREKDILQICDQFSKLDPTNCGKITLPHLLEDRS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3497 382 SUPERFAMILY Voltage-gated potassium channels 213 322 - -
Glsi02g3497 382 SUPERFAMILY Voltage-gated potassium channels 89 179 - -
Glsi02g3497 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 126 356 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi02g3497 382 Gene3D - 204 321 - -
Glsi02g3497 382 Gene3D - 78 192 - -
Glsi02g3497 382 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi02g3497 382 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi02g3497 382 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Glsi02g3497 382 FunFam Two-pore potassium channel 3 205 319 - -
Glsi02g3497 382 Pfam Ion channel 229 298 IPR013099 -
Glsi02g3497 382 Pfam Ion channel 100 179 IPR013099 -
Glsi02g3497 382 FunFam Two-pore potassium channel 5 82 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3497 Glsi-ChrGlsi02 82070365 82072217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3497 41 380 Ion Channels AT4G01840 68.116 6.02e-166 469