Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3492 ATGTCAGGCAAAATAGTCGTGTCCGTGATTTCTGTGATTCTGGTGGTGGGTTGTGCCATCGGTGTATTTGCTATTGTGAAACACAGCAGAGATAATGGCGGTGTGGTGACCTCCCACTCGAAGGCTGTGGCAGCGCTATGCCAAAAATACGTTATCTATGTTAAGGCTGGCGTTTATGACGAGTACATTCTTATTGATAAGAAGATGCCCAATATTTTCATGTACGGCGACGGCCCTACTAAAACCATTATCACCGGAAAGAAGAGCAGAACGGCAGGTTACAAGACAATGAGAAGTGCCACCTTCGCCACCCAAGCCGATAATTTCATAGGCAAGGATATGACATTTGAGAACACCGCCGGTCCTGAAGGAGAACAAGCAGTGGCACTTCGTGTGCAAGGAGAAAATTCGGCTTTTTACAACTGCCATATCGTTGGTTACCAAGACAGCTTGTATGCCCAATCCAAGCGTCAGTTCTACCGTGACTGTGAAATCTCTGGCACAGTGGACTTCATCTTTGGCGTCTCGTCCACCGTAGTCCAAAACTCCAAGATCATTGTGAGGAAGCCCGGTCCAAATCAGAAGAACATACTTGTGGCAGATGGGTCACCAGAACCTAATATGCCCACGGGAATTGTCCTTCATAAATGTGAGGTTGTTCCAGAGCCTGCCCTTGTCCCCGAGAGGCTCCAAGTGCCGACTTACTTGGCCAGGCCATGGAAGGCTTACTCAAAAGCCGTCTTCATGGAAAACATTCTTGGTGACTTAATTCAACCAGAAGGGTACCTTCCTTGGCTTGGAGATTTATACCTTAATACCTGTTTCTTCGCTGAGTATGCTAACACTGGACCTGGTGCTAAAGCTGATAGGAGGGTCAACTGGGGTCGTGGCCAACTTAGCAAGGCCGCAGCTACTAGATACACTGCTAACCAATTTATTTATGGTAACACATGGCTGCCCACCACCGGGGTTCCTTTCGACCTTGGCTTTTGA 993 0.4794 MSGKIVVSVISVILVVGCAIGVFAIVKHSRDNGGVVTSHSKAVAALCQKYVIYVKAGVYDEYILIDKKMPNIFMYGDGPTKTIITGKKSRTAGYKTMRSATFATQADNFIGKDMTFENTAGPEGEQAVALRVQGENSAFYNCHIVGYQDSLYAQSKRQFYRDCEISGTVDFIFGVSSTVVQNSKIIVRKPGPNQKNILVADGSPEPNMPTGIVLHKCEVVPEPALVPERLQVPTYLARPWKAYSKAVFMENILGDLIQPEGYLPWLGDLYLNTCFFAEYANTGPGAKADRRVNWGRGQLSKAAATRYTANQFIYGNTWLPTTGVPFDLGF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3492 330 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Glsi02g3492 330 ProSitePatterns Pectinesterase signature 2. 165 174 IPR033131 -
Glsi02g3492 330 SUPERFAMILY Pectin lyase-like 32 328 IPR011050 -
Glsi02g3492 330 FunFam Pectinesterase 4 24 330 - -
Glsi02g3492 330 PANTHER PECTINESTERASE 29 321 - -
Glsi02g3492 330 Gene3D - 24 330 IPR012334 -
Glsi02g3492 330 Pfam Pectinesterase 45 316 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3492 Glsi-ChrGlsi02 82038586 82040365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3492 21 326 Carbohydrate Esterase AT5G49180 46.474 3.64e-93 286