Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3491 ATGAGTAGCAAGATAGTTGCGGCTGTCATTTCTGTAATTCTGGTGGTAGGTTGTGCCATCGGCGTTTTTGCTGTTGTGAAACATAACAAAGATAGTGAGAGTAAGCCTGCTTCTCGTCGCCTTCTCGAACTAGATCAACAAGGCTATCCCACCTGGTTCTCCGCCGCCGATCGCAAGCTCTTATCTAAACTCCAAGGCAAAGGAGATGGAGGATTACAACCCAATGCAGTGGTTGCCAAGGATGGCTCTGGCCAATATAAAACCGTTCTTGATGCTATTAATGCATACCCAAAGAACCACAAAGGCAGATACGTTATCTATGTTAAGGCTGGCGTTTATGACGAGTACATTACTGTTGACAAAAAGAAACCCAACGTCCTCATCTACGGTGATGGCCCCACAAAAACCATTATCACTGGAAACAAGAGCTTCAAGAAGGGTTATAAGACAATGAGAACTGCCACCTTTGCCACCCAAGCCGATAATTTCATAGCCAAATCAATGGCATTCGAGAACACCGCTGGTCATGAAGGAGAACAAGCAGTGGCGCTTCGTGTGCAAGGAGAGCATTCGGCTTTCTTCGGCTGCGCCATCCGTGGTTACCAGGACACCTTGTATGCCCAATCTAAGCGTCAGTTCTACCGTGACTGTGAAATATCTGGCACAGTGGACTTCATCTTCGGCTTCTCGACCACTTTGATCCAGAACTCTAAAATCATTGTGAGGAAGCCCGGTCCAAATCAAAAGAACATAATTGTAGCAGATGGGACAAAAGAAAAGAATATGCCCACAGGAATTGTCCTTCAAAATTGTCAGATCATGCCAGAGCCTGCCCTTTCCTCTGAGAGGTTCAAGGTGCAGTCCTTCTTGGCTAGGCCATGGAAGAACTACTCAAGGGCCATCATCATGGAAAGCAATATTGGTGACTTCATCCACACAGATGGCTACCTTCCTTGGGATAGAGATTTATACCTTAAAACTTGTTACTTTGCTGAGTATGCTAACACTGGATCTGGTTCTAAGGTTGACAAGAGAGTCAATTGGGGTCGTGGCCAACTTAGCAAGGCTGAGGCTACTAGATACACTGCTGGCCAGTGGCTTAATGGCAACTTATGGCTGCCCAGCACCGGCGTTCCTTTCGACATCGGCTTTACCAAAGCTTAA 1164 0.4648 MSSKIVAAVISVILVVGCAIGVFAVVKHNKDSESKPASRRLLELDQQGYPTWFSAADRKLLSKLQGKGDGGLQPNAVVAKDGSGQYKTVLDAINAYPKNHKGRYVIYVKAGVYDEYITVDKKKPNVLIYGDGPTKTIITGNKSFKKGYKTMRTATFATQADNFIAKSMAFENTAGHEGEQAVALRVQGEHSAFFGCAIRGYQDTLYAQSKRQFYRDCEISGTVDFIFGFSTTLIQNSKIIVRKPGPNQKNIIVADGTKEKNMPTGIVLQNCQIMPEPALSSERFKVQSFLARPWKNYSRAIIMESNIGDFIHTDGYLPWDRDLYLKTCYFAEYANTGSGSKVDKRVNWGRGQLSKAEATRYTAGQWLNGNLWLPSTGVPFDIGFTKA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3491 387 FunFam Pectinesterase 70 384 - -
Glsi02g3491 387 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Glsi02g3491 387 Pfam Pectinesterase 75 370 IPR000070 GO:0030599|GO:0042545
Glsi02g3491 387 PANTHER PECTINESTERASE 25 374 - -
Glsi02g3491 387 SUPERFAMILY Pectin lyase-like 73 383 IPR011050 -
Glsi02g3491 387 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Glsi02g3491 387 Gene3D - 70 384 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3491 Glsi-ChrGlsi02 82024823 82026603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3491 1 387 Carbohydrate Esterase AT2G26450 44.987 1.31e-111 337