Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3489 ATGGCTGGAGATGTGAGCGAAACCAACTACAATGTCACCGTCTCTGCGCCGGCCGTGGACAGTGGCGGAAGAGCGGAGCCGCAATACGCGTCGGCGAAGATCTCGGTTTGGTGGGACATAGAGAACTGTCAGGTTCCAAAGAGTTGCGACCCCCATACCATCGCTCAGAATATTAGTTCTGCACTCGTCAAGATGGGCTATTGTGGCCCCGTCTCCATCTCCGCCTATGGCGACACCAATCCCATACCATCTTCTGTTCAGAAGGCACTTTCTAGCACCGGAATTTCTCTCAACCACGTCCCAGCCGGGGTGAAAGATGCTAGTGATAAGAAAATTCTAGTTGACATACTGTTCTGGGCAGTAGATAACCCTGCTCCTGCAAATTATTTGCTGATTTCTGGAGATAGGGACTTCTCAAATGCTTTACATCAGTTACGCATGAGAAGATACAACATTCTACTAGCACAACCACTAAAAGCATCAGCTCCCCTTGTTGCAGCAGCAAAAAGCGTATGGCTCTGGACGAGCCTTTCAACTGGTGGGCCCCCACTCTCAACTGGCGAATTATCACGCCTTGCAAGTGGTAGCCATGTCTTTAATTGTGAGAGGGTGCAAAACCCTGTCGCTGAGGCAAATCAATTAAGTCAGTCAATGGTTTTCAAGTCTGAAGACCTCGCTATGGGCAGTTCAAAAACCCATATTACTGGAAGGGTTGGTGATTTGAAACATAAAGGAAAATATGTTTTGAAAACTGCTTATGTGCCCGACATATCAAGATCCTCAAGCTTGCCCGTTACAGTGGCAGAGTGTAAGAACAATGAGCCCCTTAAACCTGCACAGTCGCAGATGAAGCTGTTTCGAAAAGCCCCGCATGAATTCTTTCGTAGTAGTGAGTCCATAGTTCCAACTAGTAGGTCTACACCTAATCTTCCTAGCAACCAAGACTTCTCAGGAAGTAATGGGTGCAACTTTAATGAAATTCCTCGGGATCTTTATCATAGTCCGTCGAACTCAAACAACCTCTATATGCAATCTATGTCTGGGACGGATGATATGCATAAACTACATATTTCTCGACATCCAAACAACGTTAAAAGTAACCCAAGCACTCCTCTGTCTCCTCATCGAGGTAGTTTACCTGCATCACAAACAGGCAATAAACCACATGGTGGCCAAGCATTTCACCATAAAAATTTGAACCAGAGGCATCTTAGTGGTTCTGAACATATGCTTTCTTCATCATCCACGGGAATTGCTAATACCAGTTCTAGTTATGTCCAGGGAGTTCAGGGATGTCCACGTCCACCGCCTTCAGGGTATGTGCAAGGCCTTATTGGTGTTATTCTACTGGCTTTAAACACTCTGAAGGTTGAAAAGATTATGCCTAGTGAAGCAAATATAACTGATTGCATTTCTTATGGAGAGCCCAGATATCGGACTACTGATGTCAAGAAGGCGTTAGATTGTGCAATCGAGCAACGTATGGTAGTAAAACAAAGCCTAGGTGCATTACAGTTGTATGTTGGTAGAAACGATAAACTATGGAAGTGTGTGAACCTTATCGGTGGTAATCTTAATGAGTATCCAAAAACAACATGGGATGGAATACAGAAATTCCTTACCTCATCATCTGGACGATCAGCAATTTTGGCTTCCCAGTGCAGATATGAAGCATCGTTAATTCTAAGGAAAGGGTGCCTTGAAGACCTTTTGTTAGGTGATGTACTTAAGATCTTGAATATGATCATCACTGTCAAGAAATGGATTATACATCATCAGTCTGGATGGCAGCCAATTACGATTACGCTTACCGAGACCAGAGATGATACATGGGGGGTTTCTAGTGTTAAGGTAGATAACGTGTGA 1866 0.4443 MAGDVSETNYNVTVSAPAVDSGGRAEPQYASAKISVWWDIENCQVPKSCDPHTIAQNISSALVKMGYCGPVSISAYGDTNPIPSSVQKALSSTGISLNHVPAGVKDASDKKILVDILFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPLKASAPLVAAAKSVWLWTSLSTGGPPLSTGELSRLASGSHVFNCERVQNPVAEANQLSQSMVFKSEDLAMGSSKTHITGRVGDLKHKGKYVLKTAYVPDISRSSSLPVTVAECKNNEPLKPAQSQMKLFRKAPHEFFRSSESIVPTSRSTPNLPSNQDFSGSNGCNFNEIPRDLYHSPSNSNNLYMQSMSGTDDMHKLHISRHPNNVKSNPSTPLSPHRGSLPASQTGNKPHGGQAFHHKNLNQRHLSGSEHMLSSSSTGIANTSSSYVQGVQGCPRPPPSGYVQGLIGVILLALNTLKVEKIMPSEANITDCISYGEPRYRTTDVKKALDCAIEQRMVVKQSLGALQLYVGRNDKLWKCVNLIGGNLNEYPKTTWDGIQKFLTSSSGRSAILASQCRYEASLILRKGCLEDLLLGDVLKILNMIITVKKWIIHHQSGWQPITITLTETRDDTWGVSSVKVDNV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3489 621 MobiDBLite consensus disorder prediction 353 394 - -
Glsi02g3489 621 Pfam OST-HTH Associated domain 553 606 IPR025677 -
Glsi02g3489 621 MobiDBLite consensus disorder prediction 297 322 - -
Glsi02g3489 621 Gene3D - 27 176 - -
Glsi02g3489 621 PANTHER LIMKAIN B LKAP 17 492 IPR024768 GO:0005777|GO:0010468
Glsi02g3489 621 MobiDBLite consensus disorder prediction 361 389 - -
Glsi02g3489 621 Pfam NYN domain 33 169 IPR021139 GO:0004540
Glsi02g3489 621 CDD PIN_limkain_b1_N_like 33 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3489 Glsi-ChrGlsi02 82012253 82014774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3489 25 216 C2H2 Transcription Factor Family AT5G61190 70.103 1.23e-82 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3489 02 82012253 82014774 Glsi02g3489 02 82012253 82014774 ECH