Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3488 ATGTTTGTTTTTCTGTATATACTTCACATTCAAACTTTATTACCAGTGAGAGGAATCATGAGCTGTTTCTGCTGTTGTGAAGAGGATAATCTCCATAAAGCCGCTGAGAGTGGAGGACCATATGTGACGAAAAATTCAGCAGTAAATGATGGGAATCGTCATGCTTCTGAAATTACAAAGCAGGGTGCTCAGTCTGTTAAAATCCAGCCTATTGAAGTTCCTGGTATATCAGTTGATGAACTAAAAGAAATTACTGATAACTTTGGCGCAAATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAAGCTGCAGCAATCAAGAAATTAGATGCCAGTAAACAACCTGATGATGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGTACGGAAATTTCGTTCAGTTGCTTGGTTATTGTGTTGATGGAAATTCCCGTGTTCTTGCTTATGAATTTGCATCTAATGGGTCCCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCAGTTCTGTCATGGTCACAGAGAGTAAAAATTGCTGTTGGAGCTGCAAAAGGGCTTGAGTACTTGCATGAGAAGGCGAATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTGCTAATTTTTGACGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGCTATCATGCACCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGCTTCGGTGTTGTCCTTCTTGAACTTTTGACAGGAAGAAAGCCTGTTGATCATACACTACCACGAGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAGGCAGTGCATTGATGCAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCGGTTGCTGCACTATGCGTGCAATATGAAGCTGATTTCAGACCTAACATGAGTATTGTAGTCAAAGCTCTTCAACCATTGTTGAATGCACGACCTGGACCTGCTGGTGAAACCCCAAATTAA 1143 0.4182 MFVFLYILHIQTLLPVRGIMSCFCCCEEDNLHKAAESGGPYVTKNSAVNDGNRHASEITKQGAQSVKIQPIEVPGISVDELKEITDNFGANSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDDEFLAQVSMVSRLKYGNFVQLLGYCVDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWSQRVKIAVGAAKGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCIDARLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3488 380 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Glsi02g3488 380 SUPERFAMILY Protein kinase-like (PK-like) 66 364 IPR011009 -
Glsi02g3488 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Glsi02g3488 380 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Glsi02g3488 380 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Glsi02g3488 380 SMART serkin_6 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3488 380 FunFam PTI1-like tyrosine-protein kinase 3 52 162 - -
Glsi02g3488 380 FunFam pto-interacting protein 1 164 375 - -
Glsi02g3488 380 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3488 380 Pfam Protein tyrosine and serine/threonine kinase 92 364 IPR001245 GO:0004672|GO:0006468
Glsi02g3488 380 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 23 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3488 Glsi-ChrGlsi02 82007461 82010186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3488 67 371 Receptor kinase-like Gene Family AT3G58690 48.387 2.56e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Glsi02g3488 PK_Tyr_Ser-Thr 1.4e-44 CL0016