Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3484 ATGGACGACTGCTGTGCGGTTTGCGCCGAACCTTTGGAATGGGCTGCGTACGGGTCCTGTCTGCATCGGGAGGTTTGCTCGACCTGCGTAGCTCGCCTCCGTTTCATATGCGACGATCGCCGTTGCTGCATCTGCAAGACCCAGTGCAACGTTGTATTCATCACCAAGGCTCTAGGAGATTATACAAGGATGATTAATGACTTTTCGGCCCTGCCATCTGATGTTAGGGAGGGTCAGGTGGGATCATACTGGTACCATGAAGATACAAATGCTTTTTTTGATGACGTTGACCACTACAAGATGATCAAGGCTATGTGCAAGCTTTCATGTAGTGTATGTGACAAGATGGAGGAGCAACCACATGATGCCTCAAGGCGTCGAGCAAGGTTTAGGAATATAGAGCAGCTAAAGGGTCACTTGTTCCACCGTCACAGGTTGCTTATGTGCAGTTTATGTTTGGAGGGAAGGAAGGTATTCATATGTGAACAAAAGCTATATAATAGAGCACAGTTAAATCAGCATATAAACACAGGTGATTCTGTGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCAGAACCCCATTTTATGGGGACAACGAGCTATACACTCATATGTCAACAGAACATTTTACTTGTCATATATGCCAAAGGCAGCATCCAGGACACTATGAATACTATAAGAATTATGATGACCTAGAGACTCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTATCGTCTTCCAATCTGAATCAGATATGAAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCCAAACGTAATGCTGCTCTTCAGATACCAACTAGCTTTCGATATAGACATGGTAATGAACAAGACCAACGTCGTGGAAGAGCTCGGACATTTCGTCGGGATTTTTCTGAAAGTGAAATTTCAATGGCCATTAATGCAAGCTTTGAGACAGCTAATGCAGAGAGTGCGTTTCTTGATCCAGTGACATCAAGCAGTGGACAAGTTACTCTGGATTATGGGGATGCCAATAATGATCCAAATATCCAGCCATCTGAATCCTCAGCTACATCAAGTTCTGAATTGTCTTCAAGATACCTTCAAGCCTTGGGGCATAATTCAAGAAATGCACCTTTGGAAGGTTCCTCCTTTCCTCCACTCCCCATAGCATCCATCAATGGCCAACCAAAGGCCAGACATGAGTCAGAAGGTTCATCAAGTAACACTATGGCAGCACATTTGCGCAGGCATAGAAAAGTTTCTGTTCTTAATTCTGCGCCTGCTTGGCCAGTAGCAAGTCGTGGACCTGTGCAATCATCAAGTAATCCTACACAATCTAGACTTCCAGCAAATGTTGCTCCAGGAGTGTCACGCAATTCCAATCAGACAAAAACTGTCCTTAATAGTGGACCTGCTCCGTCAACTTATGCTAGTTCTATCCAGGCTTCACAGAGAACTGCTCATGGACATTTATCTCCTGGTTCTTCAAGGGAAATGCGTGACAAGGGTAGAATTGTTCACTCTGCATCTGCTCCAAATCTTATTGAAAGCAGCCCCTTGGAACCTTCATTTTCTGATTTTCCTCCGGTGTCTGCTGCACAAGTGAGCAAGTTGCCTGCAAGCAGCCAGTCTTTGCTGAATGTGGAGGATGTCCATACTGCTAACAAGTCCTTGGTTGAAAAGATTCGTAGTGCTCTTGATTTTGATCAAGATAGATACAGTGTGTTTAAAGACATATCTGCACAATATCGCCAAGGAATACTTGATACAGGTATATATCTGGATTGCGTGCAGCAGTTTGGCTTGTCTCATCTTGTACAAGAGCTGGCTAGACTATGCCCTGATGCAAAGAAGCAGAAAGAGCTTGTTGAGTCTTACAATACCAGTTTGCGAAGAAATGCTTCAGAAGATAATGATTTAGACCATGTTAGCATTCATCGAAAAGACGGCAATGTATTGAAGAAAGGTAAAGGTAAAGGTAGGCCTATGGATACTGGAGAGAGTAACTCTAAAGAGAAATTAACAGATAGCTTTTTAAGCACTGTACGCCAATTACAGTTGAATAATAAGCCTTCAGAGGAGCAGGTGGAGGTGCTATCAAGGGGTGATTACCGCACCACTAAAGGCAAATCAAAAGTTTTGGCTGATGAACAGCTGATTGGTACAAATTCTGGTAGTCAGCACATGACAAAGCTTGGTGGACAGAGCGAAGCATCAGTTGGTAGTTTATCTAATCAAAATAAAGAGGAGGGGGGTGGTGGGGGGAAGCAACCCAAAAAATCTTCCAAGTTTCTCAGAGTCCGCCTTGGCGATGGTTCTGCAGAAGCATTGTTAGATCGTAACAAATCAAATACTAACTCGGATCATGGATCAACAGACAACTTAGAAGATAACAGGAATGATATTGGAGGGCTACCTGTGCGAGGTGTTTGGCGAAATGGGGGAGGTCATAAACTCTTTCCCTAG 2520 0.4401 MDDCCAVCAEPLEWAAYGSCLHREVCSTCVARLRFICDDRRCCICKTQCNVVFITKALGDYTRMINDFSALPSDVREGQVGSYWYHEDTNAFFDDVDHYKMIKAMCKLSCSVCDKMEEQPHDASRRRARFRNIEQLKGHLFHRHRLLMCSLCLEGRKVFICEQKLYNRAQLNQHINTGDSVVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGHYEYYKNYDDLETHFRQEHFLCEDEACLAKKFIVFQSESDMKRHNAVEHGGRMSRSKRNAALQIPTSFRYRHGNEQDQRRGRARTFRRDFSESEISMAINASFETANAESAFLDPVTSSSGQVTLDYGDANNDPNIQPSESSATSSSELSSRYLQALGHNSRNAPLEGSSFPPLPIASINGQPKARHESEGSSSNTMAAHLRRHRKVSVLNSAPAWPVASRGPVQSSSNPTQSRLPANVAPGVSRNSNQTKTVLNSGPAPSTYASSIQASQRTAHGHLSPGSSREMRDKGRIVHSASAPNLIESSPLEPSFSDFPPVSAAQVSKLPASSQSLLNVEDVHTANKSLVEKIRSALDFDQDRYSVFKDISAQYRQGILDTGIYLDCVQQFGLSHLVQELARLCPDAKKQKELVESYNTSLRRNASEDNDLDHVSIHRKDGNVLKKGKGKGRPMDTGESNSKEKLTDSFLSTVRQLQLNNKPSEEQVEVLSRGDYRTTKGKSKVLADEQLIGTNSGSQHMTKLGGQSEASVGSLSNQNKEEGGGGGKQPKKSSKFLRVRLGDGSAEALLDRNKSNTNSDHGSTDNLEDNRNDIGGLPVRGVWRNGGGHKLFP 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3484 839 MobiDBLite consensus disorder prediction 354 398 - -
Glsi02g3484 839 PANTHER ZINC FINGER PROTEIN 598 1 751 IPR044288 GO:0061630|GO:0072344
Glsi02g3484 839 MobiDBLite consensus disorder prediction 448 519 - -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 669 689 - -
Glsi02g3484 839 CDD RING-HC_ZNF598 3 54 IPR041888 -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 733 839 - -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 354 427 - -
Glsi02g3484 839 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Glsi02g3484 839 SMART c2h2final6 220 250 IPR013087 -
Glsi02g3484 839 SMART c2h2final6 196 219 IPR013087 -
Glsi02g3484 839 SMART c2h2final6 251 280 IPR013087 -
Glsi02g3484 839 SMART c2h2final6 108 144 IPR013087 -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 452 509 - -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 735 769 - -
Glsi02g3484 839 MobiDBLite consensus disorder prediction 669 693 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3484 1 838 C2H2 Transcription Factor Family AT3G62240 52.419 0.0 821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3484 02 81976929 81981142 Glsi02g3484 02 81976929 81981142 ECH