Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3477 ATGGTGGCTGATAGCATGCTTCTGTTGGATGTACAGTATCTTCCTAAAGCAAGCAATATTCAAGATATCGAAGATGCACCTGCCATCTCGCCCTCACTCGCGCCTCCCAGTTCTGACCGAGTTTGTGCTTCTGAATCACTCTCTGCCGAGTTATTGAGTTCACAAGAAGATGCTATACCTGCAGCCGCAGTCTTAGATGCTGCTCTTGACTCTGATGTTCTTCAATTTGTCCCCAGCATCCGTTCTGGCAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCTCACCTGGGATCACTATATAACTTTCCTAAACCAAGTGCCTTCTATGGGGTGTTTGACGGTCATGGAGGACCTGAAGCTGCAGTTTATATGCGGAAAAATGTGACCAGATTCTTTTTTGAAGATGTCAGCTTCCCCCAGTCATCTGAGGTAGATAATGTTTTCTTACAAGAAGTAGAGAACTCCCTAAGGAAGGCATTTCTTTTGGCTGACTCAGCTTTGGCTGACGACAGTAGTGTGAGCAGCTCATCAGGGACCACGGCACTTGCAGCTTTAATATTTGGAAGGCTTCTTATGGTGACCAATGCTGGTGATTGCCGAGCAGTTCTCAGCCGTAAAGGAGAGGCAATTGACATGTCTCAAGACCACAGGCCTATATATCCATCGGAACGGAGGCGAGTTGAAGAATTAGGCGGTTATATAGACGACGGTTATCTTAATGGGGTTTTATCAGTAACTAGAGCTCTAGGGGATTGGGATATGAAGTTCCCTCGGGGTTCTCCCTCACCTCTTATTGCAGAGCCTGAGTTCAGGCAAGTGGTTTTAACAGAGGAGGATGAATTCATCGTCATAGGATGTGATGGGATTTGGGATGTGATGTCAAGTCAGCATGCAGTGAGCCTTGTTCGGAGAAGCCTTAGGCGGCATGATGACCCAGAACAGTGCGCCAAGGACCTAGTTAGGGAGGCATTGCGCCTGAATGCGTTTGACAACCTCACAGTGATTGTTGTGTCCTTCACTTCCCTTGATCATGGGGAGGAGCCATCTCCACCTCGGAAATTGAGAAGCTGTAGCCTCTCAGCAGAGGCACTTTGTAGCTTGAGGAGCTTCTTGGAAGGCAGTGGTAGCAACTGA 1170 0.4744 MVADSMLLLDVQYLPKASNIQDIEDAPAISPSLAPPSSDRVCASESLSAELLSSQEDAIPAAAVLDAALDSDVLQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAVYMRKNVTRFFFEDVSFPQSSEVDNVFLQEVENSLRKAFLLADSALADDSSVSSSSGTTALAALIFGRLLMVTNAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYIDDGYLNGVLSVTRALGDWDMKFPRGSPSPLIAEPEFRQVVLTEEDEFIVIGCDGIWDVMSSQHAVSLVRRSLRRHDDPEQCAKDLVREALRLNAFDNLTVIVVSFTSLDHGEEPSPPRKLRSCSLSAEALCSLRSFLEGSGSN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3477 389 Gene3D - 73 356 IPR036457 -
Glsi02g3477 389 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Glsi02g3477 389 Pfam Protein phosphatase 2C 91 343 IPR001932 -
Glsi02g3477 389 ProSiteProfiles PPM-type phosphatase domain profile. 81 351 IPR001932 -
Glsi02g3477 389 SUPERFAMILY PP2C-like 76 352 IPR036457 -
Glsi02g3477 389 PANTHER PROTEIN PHOSPHATASE 2C 71 350 IPR015655 GO:0004722|GO:0006470
Glsi02g3477 389 FunFam Probable protein phosphatase 2C 22 66 354 - -
Glsi02g3477 389 CDD PP2Cc 80 351 IPR001932 -
Glsi02g3477 389 SMART PP2C_SIG_2 96 351 IPR001932 -
Glsi02g3477 389 SMART PP2C_4 71 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3477 Glsi-ChrGlsi02 81945393 81947862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3477 94 385 PP2C-type Phosphatase Gene Family AT3G62260 69.048 1.02e-149 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Glsi02g3477 PP2C 7.6e-66 CL0238