Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g3462 | ATGGATGCTGATAAGGTGAAAGGCTGTCCTGCAGCAAATCAAAGCGAAGACCACATGGGCATCAGGAAAGGTCCATGGACCGTTGAAGAAGACAACATTCTCGCAAATTACATAGCTAACCACGGTGAAGGTCGCTGGAATTCCGTCGCCCGATGTGCAGGTCTGAAGAGAACGGGCAAAAGTTGCAGATTAAGATGGCTAAACTACTTGCGTCCTGATGTTCGGCGTGGAAATATCACACTCCAAGAACAGATATTAATTCTTGATCTCCATTCTCGGTGGGGCAATAGGTGGTCTAAAATTGCCCAGCAATTGCCTGGAAGAACAGACAACGAGATAAAAAATTATTGGAGAACCAGAGTGATAAAGCAGGCTAAGCAGCTCAAGTGTGACGTCAATAGCAAACAGTTCAGAGACGCCATACGCTACGTATGGATGCCCCGCTTGCTGGAGCGGATTCGGGCCGCATCTGGATACCACCCGAGCTGCCAACCTCCGAAAGAGCTGGACCCAACTGGGCTCCTTTACCAACAGGGGATGCAGGGTTCAGAAACAAGGGGTGTAAAACCAAATTACTCCTCCAGCGCTTCGTATTCAGCAACGGATGTCCAGATTTCGGAGCAAAGCGAATCTTGTGAAATAGTTGGTCATTCTACAGGAAATGGGTCGGTTACCCAAGTGTTAGAGCAGGGGAATACATTGGGTGGTGGGGATTCATTGGAGAATCTATGGAACGATGAGAATGTATGGTTTTTACGACAACAGCTTTGTGATGAGGAAAGAGTTTGTGGGAAGGAAGCCAGCAGATTCGGTTGGAAACGTATCCTCTTAGTATATGCTCTTGCACTGGAAACGGGTGTTCCTATGATGAGAAGTTTATCAGATTGTGGCTCATCAGCAACGCATGGACATGGTAGCGAAGAAGAGACGGTAATAAAGAAAGGTCCGTGGACTGAGGAAGAGGATTCCCTTCTGGCCAACTACATCAACGTTCACGGCGAAGGTCTGAAGAGAACCGGCAAAAGCTGCAGATTAAGATGGTTAAACTACCTGCGTCCAAATGTTCGACGTGGGAACATCACCCTCCAAGAACAGCTCTTGATTCTTGAACTCCATTTCCGCTGGGGCAATCGGTGGTCGAAAATAGCGCAACAGTTGCCAGGCAGAACAGACAACGAGATAAAAAACTATTGGAGGACCAGAGTGGTGAAGCAGGCAAAGCAACTCAAATGTGAAGTGAATAGCAAAGAGTTCAGAGACGCCTTGCGTTTCGTATGGATGCCTCGCCTACTGGAGCGGATCCGGGCCTCATCCGCCTCTGATTCAGGCCCTTCGCCTCACTCTGTAGTTGATGCCCAAGCTCCTTCTTCTGTGTCAGGTGCAGAAGAAGGACCCACTTCATGGCAGCAGATGGAAGTTGAATCAAGCAATGACTTGTGGACAGATGAAAACATATGGTTTTTGCAACAACAACTAGCCGATGAGATTTGA | 1491 | 0.4802 | MDADKVKGCPAANQSEDHMGIRKGPWTVEEDNILANYIANHGEGRWNSVARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDAIRYVWMPRLLERIRAASGYHPSCQPPKELDPTGLLYQQGMQGSETRGVKPNYSSSASYSATDVQISEQSESCEIVGHSTGNGSVTQVLEQGNTLGGGDSLENLWNDENVWFLRQQLCDEERVCGKEASRFGWKRILLVYALALETGVPMMRSLSDCGSSATHGHGSEEETVIKKGPWTEEEDSLLANYINVHGEGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILELHFRWGNRWSKIAQQLPGRTDNEIKNYWRTRVVKQAKQLKCEVNSKEFRDALRFVWMPRLLERIRASSASDSGPSPHSVVDAQAPSSVSGAEEGPTSWQQMEVESSNDLWTDENIWFLQQQLADEI | 496 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g3462 | 496 | Gene3D | - | 24 | 75 | - | - | |
Glsi02g3462 | 496 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Glsi02g3462 | 496 | Gene3D | - | 361 | 402 | - | - | |
Glsi02g3462 | 496 | Gene3D | - | 80 | 121 | - | - | |
Glsi02g3462 | 496 | Pfam | Myb-like DNA-binding domain | 357 | 400 | IPR001005 | - | |
Glsi02g3462 | 496 | Pfam | Myb-like DNA-binding domain | 23 | 70 | IPR001005 | - | |
Glsi02g3462 | 496 | Pfam | Myb-like DNA-binding domain | 314 | 351 | IPR001005 | - | |
Glsi02g3462 | 496 | Pfam | Myb-like DNA-binding domain | 76 | 119 | IPR001005 | - | |
Glsi02g3462 | 496 | Gene3D | - | 312 | 357 | - | - | |
Glsi02g3462 | 496 | MobiDBLite | consensus disorder prediction | 438 | 476 | - | - | |
Glsi02g3462 | 496 | CDD | SANT | 316 | 400 | IPR001005 | - | |
Glsi02g3462 | 496 | MobiDBLite | consensus disorder prediction | 437 | 476 | - | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 352 | 406 | IPR017930 | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-like domain profile. | 71 | 121 | IPR001005 | - | |
Glsi02g3462 | 496 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 20 | 210 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-like domain profile. | 309 | 402 | IPR001005 | - | |
Glsi02g3462 | 496 | FunFam | MYB transcription factor | 80 | 143 | - | - | |
Glsi02g3462 | 496 | SUPERFAMILY | Homeodomain-like | 312 | 398 | IPR009057 | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 75 | 125 | IPR017930 | - | |
Glsi02g3462 | 496 | CDD | SANT | 80 | 119 | IPR001005 | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-like domain profile. | 18 | 70 | IPR001005 | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 312 | 351 | IPR017930 | - | |
Glsi02g3462 | 496 | FunFam | MYB transcription factor | 361 | 424 | - | - | |
Glsi02g3462 | 496 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 18 | 74 | IPR017930 | - | |
Glsi02g3462 | 496 | SMART | sant | 75 | 123 | IPR001005 | - | |
Glsi02g3462 | 496 | SMART | sant | 22 | 72 | IPR001005 | - | |
Glsi02g3462 | 496 | SMART | sant | 356 | 404 | IPR001005 | - | |
Glsi02g3462 | 496 | SMART | sant | 313 | 353 | IPR001005 | - | |
Glsi02g3462 | 496 | CDD | SANT | 25 | 70 | IPR001005 | - | |
Glsi02g3462 | 496 | FunFam | Myb transcription factor | 23 | 75 | - | - | |
Glsi02g3462 | 496 | SUPERFAMILY | Homeodomain-like | 19 | 117 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g3462 | Glsi-ChrGlsi02 | 81845991 | 81853065 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g3462 | 298 | 438 | MYB Transcription Factor Family | AT2G47190 | 66.225 | 2.47e-65 | 211 |