Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3446 ATGGGAGTTTCTTCACAACCTTTCCTTGTTTCCCTTTCTCTGAAAGATCTGTTTCAAGGGACCGAAGAAAACAAAAACAATTCATCATATGGGTGTTTGTGGAGAAAAGTCATGGCAGCCCAAGCCAAGAAGCAGAAGCTCGCGAAGAAAAGTGGGACGAGCAGAAGGCAAGGAAGGATTTTAATGAAGAGGAGGGCACGCTTAATGGAAGGTTCTAGAAGACGAGGAAACAAGATTGAGACAAGGGTGAGGACATTGAAGAGGCTTATACCCAATACCGAGTCCTTGGGGTTGGATGGACTCTTCAGAGAGACAGCTGATTACATTTTGTCATTACAAATGAGAGTGAGAGTGATGCAGATTATGGTTGAGTTATTGGCAGGTTCTGATGAGTGA 396 0.4394 MGVSSQPFLVSLSLKDLFQGTEENKNNSSYGCLWRKVMAAQAKKQKLAKKSGTSRRQGRILMKRRARLMEGSRRRGNKIETRVRTLKRLIPNTESLGLDGLFRETADYILSLQMRVRVMQIMVELLAGSDE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3446 131 MobiDBLite consensus disorder prediction 45 76 - -
Glsi02g3446 131 CDD bHLH_AtIBH1_like 70 123 IPR044549 GO:0006355
Glsi02g3446 131 MobiDBLite consensus disorder prediction 48 62 - -
Glsi02g3446 131 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 112 IPR011598 GO:0046983
Glsi02g3446 131 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 34 126 IPR044660 GO:0006355
Glsi02g3446 131 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3446 Glsi-ChrGlsi02 81719216 81719611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3446 61 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 54.930 6.89e-20 76.6