Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3444 ATGCGTTTTTCAGAGTTTTCTTTCTTCATTTTTACATTGCTAATCCTTTCTTTCAGTATTTGCAAAGCTTTGAATTGTGCCAGTCCTCCCAAAATTGTAACAGTTAGTCAATCAAGTCGTGCAAACTTCAAAACTATTCAAAGTGCAATCGATTCTATCCCTGAAAATAACTCTCAATGGATTCACATCCAAATTTCACCTGGCGTTTACAGAGAGCAAGTCACAATTGTTCGATTGAAAACGTGCATTTATCTAGAAGGAGCTGGTATTAAATACACAAGTATCGAGTGGAATAACCATATGTCGCGATTTAGTCCCACTTTCAATTCAAGAGCAGATAACATTGTCGCAAAGGGCATTACTTTCAAGAATACGTATAACGATCCGATCATGATGGACAAAAACAACATTGAGCCGGCCGAAGCTGCTAGAGTAGAAGGCGATAAGTGTGCTTTTTTTGGATGTGCTTTTCTTGGGGTGCAAGATACCCTGTATGATCACAGTGGCCGTCATTACTTTCACAAGTGCTACTTTCAAGGAGGAATAGATTTCATATTTGGGGATGGCCAATCTATCTATGAGGAAAGCATAATCAACTTTTCAATGGGAAAAAATAGCTCACCTATCGGTGGATTTATCACTGCACAGCAAAGGGAATCAGCAACTAGTAACAGCGGGTTTGTGTTCAAAAATTGTAGCATAACTGGGAGGGGAAAAGGAGTGGCTTTGCTTGGAAGAGGCTATAGGCCTTATTCGAGAGTCATCATAGCCAACTCATTTCTAGGGGACGTGGTTAAACCAGAGGGCTGGGAGGCTTGGAATGGTGCAGGCCACGAAGAAAACCTAACGTATGTGGAGGAGGGATGCAGGGGACCGGGTGCCGACAAATCCAAGCGCGTGCCTTGGATGAAGCACTTGAGTGGAAGCGAGCTTGACCAATTCTTGAGTATGGCCTTCATCGATAAAGAAGGATGGATTGCAAAACTTCCAATAAGGACCCCCTAA 1005 0.4249 MRFSEFSFFIFTLLILSFSICKALNCASPPKIVTVSQSSRANFKTIQSAIDSIPENNSQWIHIQISPGVYREQVTIVRLKTCIYLEGAGIKYTSIEWNNHMSRFSPTFNSRADNIVAKGITFKNTYNDPIMMDKNNIEPAEAARVEGDKCAFFGCAFLGVQDTLYDHSGRHYFHKCYFQGGIDFIFGDGQSIYEESIINFSMGKNSSPIGGFITAQQRESATSNSGFVFKNCSITGRGKGVALLGRGYRPYSRVIIANSFLGDVVKPEGWEAWNGAGHEENLTYVEEGCRGPGADKSKRVPWMKHLSGSELDQFLSMAFIDKEGWIAKLPIRTP 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3444 334 FunFam Pectinesterase 28 330 - -
Glsi02g3444 334 SUPERFAMILY Pectin lyase-like 29 328 IPR011050 -
Glsi02g3444 334 Gene3D - 31 333 IPR012334 -
Glsi02g3444 334 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 327 - -
Glsi02g3444 334 Pfam Pectinesterase 33 321 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi02g3444 Glsi-ChrGlsi02 81702759 81704135 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3444 6 279 Carbohydrate Esterase AT2G19150 45.161 3.18e-72 224