Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3443 ATGGCATGGGAAACTTGCAGAGAGCAAGTCTCAATTACTCCTCTCAAAACATGCATTTATCTTGAAGGAGCAGGAATGAAATACACCAGCATCGAGTGGAATAACCATATGTTACAAAATAATGCTACTTTCAATTCAAGAGCACATAACATTGTTGCAAAGGGCATTACTTTCAAGAATACGTATAACGATCCGATCATGATGGACAAAAACAACATTGAGCCAGCCGAAGCTGCTAGAGTAGAAGGCGATAAATGTGCTTTTTTTGGATGTGCTTTTCTTGGGGTGCAAGATACCCTGTATGATCACAGTGGCCGTCATTATTTCCATAGATGCTACTTTCAGGGTGGAGTAGATTTCATATATGGGGATGGCCAATCTATCTATGAGGAAAGCATAATCAACTTTTCAATGGGAAAAAATAGCCCACCAGGCGGTGGATATATTACTGCACAGCAAAGGGAATCGGCTACTAGTACTAGTGGGTTTGTGTTCAAAAATTGTACGATAACTGGGAGGGGAAAAGGATTGGCTTACCTTGGGAGAGGATATAGACCTTACGCCAGAGTCATCATAGCCAACTCATTTCTAAGCGACGTGGTTAAACCAGAGGGCTGGGACGCTTGGACTGGTGCTGGCCATGAAGGCAACCTAACGTATGTGGAGGAGGGATGCAGGGGACCGGGTGCTGACAAGTCCAAGCGCGTGCCTTGGATGAAGCACTTAAGTGGAAGCGAGCTTGACCAGTTCTTGAATATAGCCTTCATCGATCAAGAAAGATGGATTGCAAAACTTCCAATATGA 804 0.4391 MAWETCREQVSITPLKTCIYLEGAGMKYTSIEWNNHMLQNNATFNSRAHNIVAKGITFKNTYNDPIMMDKNNIEPAEAARVEGDKCAFFGCAFLGVQDTLYDHSGRHYFHRCYFQGGVDFIYGDGQSIYEESIINFSMGKNSPPGGGYITAQQRESATSTSGFVFKNCTITGRGKGLAYLGRGYRPYARVIIANSFLSDVVKPEGWDAWTGAGHEGNLTYVEEGCRGPGADKSKRVPWMKHLSGSELDQFLNIAFIDQERWIAKLPI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3443 267 Pfam Pectinesterase 7 257 IPR000070 GO:0030599|GO:0042545
Glsi02g3443 267 SUPERFAMILY Pectin lyase-like 7 263 IPR011050 -
Glsi02g3443 267 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 263 - -
Glsi02g3443 267 Gene3D - 4 267 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3443 Glsi-ChrGlsi02 81697488 81698570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3443 8 262 Carbohydrate Esterase AT1G05310 40.152 1.81e-62 199