Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3440 ATGTCGGTGCTTCCAGTTTCTATTTCAATCGGTGTGTTGGAAAAGGTTCATTTTTTGTCGATGAAATGGTTGCTTGCCTTATCTTGCCTAGTTTATATTTCTGATGCTGGTGTATATGATAAAACACTGGAAGGCCCATCATTATCTCCAGCTGAACCACCTTTGGTTGCTGTTGTTGTCCACAATCTACCCCTACCAGCAAATATCCATGGGGGGAGGCATTTCCCATACCGTGGTGCACCAATGCCAACACTTTCACCAGTCTATCCTCCTTTATATGGTCCTTCAATAAGTACTGGTCAACCTCCTGCGAGTTCACGTTTATCCAAACCATTCTTGAAGAGGAGAGATTTAAGACCTCCAATTTCTGGCTTTAAAGACATTGCCCCAACGCATTCTACTGCTGGTGCAATTCCTTCTGGCCTGGCTCAGCCTCCATTATCCCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGTTAAAGCGAGGGAGTAAGAGTTGCCAATGTGTGTACCCTATAAAGCTAGATCTTCTCCTTTTGAATGTCTCGCAAAATCCTAATTGGAATCTTTTTCTGGAAGAAATAGCTACCCAACTTGGGTTGCAGACTACTCAGATTGAACTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCAATGGATATTACTCCACATAAAGGGATCGGTTTCTCAACCATTGAAGCATCTAATATAAACCATTTGCTTTCAATGCATAAGGTTCAACTAGACCCTAGATTAGTGGGTGACTACAAACTTCTAAATATAACCTGGTTTGAGCCTCCACCTCCATCACAAGCTCCTACTTTTGCTGCATCACCCATAAAAGCCCCTCTCCGTCATTCACCAACTTCTACATCACCGAATGCTTCAAATGGGGGGAGACATTCAAATTTGTTTCTTATTCTTGGAATTGGTGCCGGCATACTCTTCGTTTCCATTGTCTCTGTATTTATACTTTGTTTATGCACATTACAACCGAAGGCAAAATCAGCACCTATAGAAATGGAAAAGCCAAGGACAGAAAGAACAGTTTCAGCTGTCGGATCTCTTCCCCACCCAACCAGTACACGATTTATTGCTTATGAAGAACTGAAAGAAGCAACAAACAACTTTGAACCTGCAAGCGTACTTGGAGAAGGCGGGTTTGGTAGAGTTTTTAAGGGTGTCTTAAATGATGGTACTGCTGTAGCAATTAAGAGGCTTACTGGTGGAGGGCAACAGGGGGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGCAATCTTGTAAAACTAGTGGGGTACTTTAGTAGTCGTGACATTTCACAAAATCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCCTGGGAATAAATTGCCCTTTGGATTGGGACACCAGAATGAAGATCGCCCTTGATGCTGCAAGAGGACTTGCGTACCTGCATGAAGACTCGCAGCCCTGTGTTATACACAGAGATTTCAAGGCGTCCAATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAACAGGCGCCTGAAGGCAGAGCTAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTACGTAGCTCCTGAATATGCAATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTCGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAACTGGACAAGAAAACCTTGTTACTTGGGCAAGGCCAATCCTTAGAGATAAGGACCGGTTGGAAGAGCTTGCTGATCCAAAGCTTGGGGGGAAGTACCCAAAGGAAGATTTTGTCCGTGTTTGCACTGTTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGCGAAGTGGTACAGTCCCTTAAAATGGTGCAACGCATCACAGAACATCAGGATTCCATGTTAGCCTCCTCCAATACACGGCCTAACCTAAGACAGTCGTCTACCACTTTTGAGTCTGATGGGACATCTTCAATGTTCTCTTCCGGTCCGTACTCTGGTCTAAGTGCTTTTGACAATGACAACATGCCCAGGACGGCTGTTTTCTCCGAAGATCTTCATGAAGGACGATGA 2181 0.4402 MSVLPVSISIGVLEKVHFLSMKWLLALSCLVYISDAGVYDKTLEGPSLSPAEPPLVAVVVHNLPLPANIHGGRHFPYRGAPMPTLSPVYPPLYGPSISTGQPPASSRLSKPFLKRRDLRPPISGFKDIAPTHSTAGAIPSGLAQPPLSPYASNCCKQDMVLKRGSKSCQCVYPIKLDLLLLNVSQNPNWNLFLEEIATQLGLQTTQIELINFYVLSLSTLNISMDITPHKGIGFSTIEASNINHLLSMHKVQLDPRLVGDYKLLNITWFEPPPPSQAPTFAASPIKAPLRHSPTSTSPNASNGGRHSNLFLILGIGAGILFVSIVSVFILCLCTLQPKAKSAPIEMEKPRTERTVSAVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTGGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSSRDISQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELADPKLGGKYPKEDFVRVCTVAAACVAPEASQRPTMGEVVQSLKMVQRITEHQDSMLASSNTRPNLRQSSTTFESDGTSSMFSSGPYSGLSAFDNDNMPRTAVFSEDLHEGR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3440 726 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Glsi02g3440 726 Gene3D Transferase(Phosphotransferase) domain 1 460 680 - -
Glsi02g3440 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Glsi02g3440 726 PANTHER OS01G0750732 PROTEIN 151 675 - -
Glsi02g3440 726 Gene3D Phosphorylase Kinase; domain 1 344 459 - -
Glsi02g3440 726 Pfam Protein kinase domain 385 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3440 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 460 676 - -
Glsi02g3440 726 SUPERFAMILY Protein kinase-like (PK-like) 358 659 IPR011009 -
Glsi02g3440 726 CDD STKc_IRAK 388 658 - -
Glsi02g3440 726 ProSiteProfiles Protein kinase domain profile. 382 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g3440 726 MobiDBLite consensus disorder prediction 668 695 - -
Glsi02g3440 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 362 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3440 Glsi-ChrGlsi02 81678868 81684427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3440 1 726 Receptor kinase-like Gene Family AT4G02010 67.170 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi02g3440 Pkinase 1.7e-43 CL0016