Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3436 ATGGATGGTGCTGCCTCCCCAGAAGCATCTTCAGAGCTCAAAGTAGAAAATCAAGCATCCAAAAAAAGGAAAACAATTCAGAAAACAGTTGTGACAGTGAGAATTGGAGAAAATGTTAGCAAACTGAAGAATGAAGGGCTACCTTCTGATTTCTGGTCTTGGAGGAAATATGGGCAAAAGCCTATTAAAGGATCTCCATATCCAAGGGGCTATTACAGGTGCAGCACATCCAAGGGTTGTTCAGCCAAAAAACAAGTAGAGAGATGCAGAACGGATGCTTCAATGCTCATCATTACTTACACCTCCACCCACAACCATCCAGCTCCTGATCCTCCCTCCACCACCAATCTAACTTCCCAAAATCAGACCACCGAAGATATTCCAGCCGCGTCCAAGCTGGAAGACCAAGAGAAAGAAGAAGAGAAAAAGGATCATGAGCCCACTACGACTCATGATCAATGTGCAAATGAAGAAATTTTTTATTACCTACAATCACCAATACAGTGCTCCGAGGACATTATCATTGACCAAGAAGATCCCTTCGAATTGAACCCAGAGAAAACCCATGACAGAATAGATCTCCTCTTGGAGAAAGAGCCCCTATGTTTTTCTCAGTTCAACAACTCGTCAACACCCAAATCGGAAGAACATGACTTTTTCGATGAGCTAGAAGAGCTACCCATATCTTCACCTTTCTTAAACTTCACGAGGAGCAATTTTTCCGAGGAAAGGATTGCTGTTGTCCCTTCTTGA 753 0.4303 MDGAASPEASSELKVENQASKKRKTIQKTVVTVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPAPDPPSTTNLTSQNQTTEDIPAASKLEDQEKEEEKKDHEPTTTHDQCANEEIFYYLQSPIQCSEDIIIDQEDPFELNPEKTHDRIDLLLEKEPLCFSQFNNSSTPKSEEHDFFDELEELPISSPFLNFTRSNFSEERIAVVPS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3436 250 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 232 IPR044810 GO:0003700
Glsi02g3436 250 MobiDBLite consensus disorder prediction 102 151 - -
Glsi02g3436 250 MobiDBLite consensus disorder prediction 130 151 - -
Glsi02g3436 250 Gene3D WRKY domain 33 110 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g3436 250 MobiDBLite consensus disorder prediction 102 129 - -
Glsi02g3436 250 FunFam WRKY transcription factor 65 31 109 - -
Glsi02g3436 250 SUPERFAMILY WRKY DNA-binding domain 45 109 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g3436 250 ProSiteProfiles WRKY domain profile. 43 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3436 250 Pfam WRKY DNA -binding domain 50 107 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3436 250 SMART WRKY_cls 48 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g3436 250 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3436 Glsi-ChrGlsi02 81668311 81669458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3436 4 232 WRKY Transcription Factor Family AT4G01250 38.428 1.24e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g3436 WRKY 1.9e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3436 02 81668311 81669458 Glsi02g3436 02 81668311 81669458 ECH