Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3434 ATGGCGAATGAACTTTTTTCTTTCACGCCTTTGAATTTCAATGGAATCCAGGGCGGTTATGGTTCTATACAAGAGGAAGTAGTGTTTCCGGGGAAACGCAGTTTATCTGGAATGGAATCTTTGCGGGACATTAATTCTCTCTCTAATGGATCTGGGAAAGCAGCCCATTTGTTCAGAGATCAAAATAAGCAGCAGCAGCAACAAGAAGAGCCCAGATTTGATAACTCGATGTTGGAAGAGTTCAGCTTCGATCCTGCTCTGCAACCGACACAGCCGTTTCAGGAAACTATGGGGCTAAAGAATCAGGGAGTAACAAGTTCAGAACTCGTTGAATACCACAAGCAGGTGCCACAATCTTCTTCTTTAGCATCACTGGAGCTCCTGAGTAATTACGCAAGTAGTTTCAAGAGGTTAAGGGGCCAAGATATAAGCAACTTCAACAAAAGTGAAACTCGTGTGGATCGCCAGAAGTTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATGTCCAATTCTCTGCTCATTGGTACGATAATTTTTGCATGCCGATGCACCCATATGGCTTTGGTCTTGAGGCTCTGTCTGAGGAAGAAAGCGGAGATGTTGAACTCGCTCAGTTTCTTCTGGCTGCAGCCGAGAGGGTAGGCTGCCAACAATTTGAACGTGCAAGCAAATTTCTTCTACATTGTCTATGGGATTCATCTGCTGTTCCAAACTCAGTTCAGAGAGTCATCTTCCATTTCGCTCAAGCACTTCGGGAGAGAATCGACAAAGAAACAGGGAGGATGACACTAAAGGGATATGAGAAAAAGTCAGAAAACGAATTGATTCAAAAGTTGGATACCAACATTTCTCTTACATGCCATCAAAAGATCCCTTTCCATCAGGTAATGCAATTCGCCTGTGTTCAAGCTATAGTGGAACATGTTGCATCTGGTACTAAGATCCATTTAATAGATCTTGAAATTAGACATGGGATGCAGTGGACATGTTTAATGCAGGCGCTAGCAGAGCGCAAGGAAAGACCAGTAGTGTTTCTGAAGATAACTGCTATTGGATATACTGGCCAAACCAAGTTAGAAGAGACAGGCAAAAGGTTAGCAAGTTTTGCTGAATCCTTGAACTTGCCCTTTTCATATAAGGCAGTTTTTGTTACAGACTTGATAGAAATCAAGGAAGATCAAATTGAAATTGAAGATGATGAAGCTGTGGCTGTCTACGCTCCTTATGTGTTGAGGACTATGATATCAAGTGCTTATAGCTTGGAAAACTTGATGGGTGTAATAAGAAATATCAGACCATCTATAATGATAGTACTTGAAGTGGAAGCAAATCATAATTCATCCTCCTTTGCGAATCGCTTCATTGAAGCATTGTTCTTCTACTCGGCATTTTTCGATTGCGTTGAAACCTGCATAAAACAGGAGAATGAGTACAGAATGACAATCGAAGCAATATTTCGTGAAGGGATACGAAACATTGTTGCCACGGAAGGCAGAGAAAGAACAGTCAGGAATGTGAGAATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAGTTGGATTTAGCGAGTCATCTCTGTACCAAGCTAACCTGGTGGTCAAAGAGTTTGCTTCGGGGAATTTTTGCACCATTGATAAAAATGGAAAATGTCTAATTGTTGGGTGGAAGGGGACCCCAATGCATTCCGTTTCAGCTTGGAGGTTCCCTTGA 1731 0.4211 MANELFSFTPLNFNGIQGGYGSIQEEVVFPGKRSLSGMESLRDINSLSNGSGKAAHLFRDQNKQQQQQEEPRFDNSMLEEFSFDPALQPTQPFQETMGLKNQGVTSSELVEYHKQVPQSSSLASLELLSNYASSFKRLRGQDISNFNKSETRVDRQKLSAEEIIRVAGARYVQFSAHWYDNFCMPMHPYGFGLEALSEEESGDVELAQFLLAAAERVGCQQFERASKFLLHCLWDSSAVPNSVQRVIFHFAQALRERIDKETGRMTLKGYEKKSENELIQKLDTNISLTCHQKIPFHQVMQFACVQAIVEHVASGTKIHLIDLEIRHGMQWTCLMQALAERKERPVVFLKITAIGYTGQTKLEETGKRLASFAESLNLPFSYKAVFVTDLIEIKEDQIEIEDDEAVAVYAPYVLRTMISSAYSLENLMGVIRNIRPSIMIVLEVEANHNSSSFANRFIEALFFYSAFFDCVETCIKQENEYRMTIEAIFREGIRNIVATEGRERTVRNVRIDVWRRFFARYRMVEVGFSESSLYQANLVVKEFASGNFCTIDKNGKCLIVGWKGTPMHSVSAWRFP 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3434 576 ProSiteProfiles GRAS family profile. 197 574 IPR005202 -
Glsi02g3434 576 Pfam GRAS domain family 207 574 IPR005202 -
Glsi02g3434 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 567 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3434 Glsi-ChrGlsi02 81661937 81663667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3434 196 575 GRAS Transcription Factor Family AT1G66350 30.446 1.03e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi02g3434 GRAS 2.7e-85 CL0063