Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3430 ATGGCTTCGAATCAACGTCCAGCAAGTTCGGGATCTGATGTAGGAGACCCAAGATCTGATGTGATAGATGAGAGGAAGAGGAAGAGAATGCTGTCTAACCGTGAATCGGCAAGGCGATCACGGATGAGGAAGCAGAAGCAACTGGAAGATCTGACCAATGAAATCAGCCGATTGCAAGCTGCAAACAGTCAGCTAGCTCAGAGCATAAAGGAAAAGGAGGAGGCATACAGTGAGACTGAATCTGCCAACACTATCCTGAGGGCTCAGACTAGGGAGTTGTTTGATCGATTGCGTTTTCTGAACTCGATCCTTGAGATCGCTGAAGAGGTCAGCGGGCTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTTCTGAAGCCATGGCAGCATCCTTATCCAATACAGCCGATCATGGCATCCGCAGACTTGATCCTGCATTGA 441 0.4921 MASNQRPASSGSDVGDPRSDVIDERKRKRMLSNRESARRSRMRKQKQLEDLTNEISRLQAANSQLAQSIKEKEEAYSETESANTILRAQTRELFDRLRFLNSILEIAEEVSGLSVEIPEIPDPLLKPWQHPYPIQPIMASADLILH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3430 146 FunFam BZIP transcription factor 23 74 - -
Glsi02g3430 146 Gene3D - 23 80 - -
Glsi02g3430 146 SUPERFAMILY Leucine zipper domain 25 73 IPR046347 GO:0003700|GO:0006355
Glsi02g3430 146 CDD bZIP_plant_GBF1 26 77 IPR045314 GO:0003700|GO:0006355
Glsi02g3430 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Glsi02g3430 146 Pfam bZIP transcription factor 25 83 IPR004827 GO:0003700|GO:0006355
Glsi02g3430 146 Coils Coil 34 89 - -
Glsi02g3430 146 MobiDBLite consensus disorder prediction 1 48 - -
Glsi02g3430 146 MobiDBLite consensus disorder prediction 17 48 - -
Glsi02g3430 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Glsi02g3430 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 141 - -
Glsi02g3430 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3430 Glsi-ChrGlsi02 81650695 81651135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3430 1 144 bZIP Transcription Factor Family AT3G62420 57.241 2.03e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi02g3430 bZIP_1 1.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3430 02 81650695 81651135 Glsi11g0443 11 2904107 2904547 CCT
Glsi02g3430 02 81650695 81651135 Glsi02g3430 02 81650695 81651135 ECH