Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3383 ATGCCCGGCGACACTCACACCCCTAATCCCAAGGGTCTCCTCTGCATTGCTGGGGCTGGTGCAGCTGCCGGAGTTATTGCTGCTACCTTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCATGGGCTGCCAGAGCTCGCTAATGGAAGTATTAAAGGTAGTCTAATAGTCGGTAGTTTGGAACAAATAGTTCATAAGGAGGGCCTACGTGGCATGTACCGGGGTCTGGCTCCTACTGTGCTGGCGTTACTTCCAAACTGGGCGGTTTATTTTACTGTGTATGATCAGCTCAAAAGCTGCTTTTGTTCTGATGATGAAAGGCATCATCTTTCAATTGGAGCCAACATGATAGCTGCTTCTGGAGCTGGAGCTGCAACTACCTTTGCCACAAATCCACTTTGGGTTGTCAAGACAAGACTTCAAACTCAGGGAATGAGACCTGGTATTGTGCCATATAGGAGCACACTATCGGCTTTGAGGAGAATTGCTCATGAGGAGGGCATTCGGGGCTTGTACAGTGGCCTCGTACCTGCACTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACATATGAGAAAATAAAATTCTATTTGGCAAATCAAGATAACACAGCAATGGATAAGCTTGGTGCACGTGATGTTGCCATTGCTTCATCAGTCTCCAAAATTTTTGCATCCACTTTGACTTATCCTCACGAGGTTGTACGGTCTAGACTACAAGAGCAAGGGCACCACTCTGAAAAACGGTACTCTGGTGTGATTGATTGCATTAGAAAGGTATTTCAGCAAGATGGCCTACCTGGTTTTTACCGTGGCTGTGCCATCAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACATCGGTTTCTTGTTTCACAATTCCCTTCTGACCCGCAGCCTCATATTTTGTGA 948 0.4641 MPGDTHTPNPKGLLCIAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPELANGSIKGSLIVGSLEQIVHKEGLRGMYRGLAPTVLALLPNWAVYFTVYDQLKSCFCSDDERHHLSIGANMIAASGAGAATTFATNPLWVVKTRLQTQGMRPGIVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLANQDNTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCIRKVFQQDGLPGFYRGCAINLLRTTPAAVITFTSFEMIHRFLVSQFPSDPQPHIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3383 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 303 IPR044712 GO:0006862|GO:0055085
Glsi02g3383 315 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 110 305 - -
Glsi02g3383 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Glsi02g3383 315 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 3 109 - -
Glsi02g3383 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Glsi02g3383 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Glsi02g3383 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Glsi02g3383 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Glsi02g3383 315 Gene3D Mitochondrial carrier domain 17 305 IPR023395 -
Glsi02g3383 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Glsi02g3383 315 Pfam Mitochondrial carrier protein 19 105 IPR018108 -
Glsi02g3383 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Glsi02g3383 315 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
Glsi02g3383 315 SUPERFAMILY Mitochondrial carrier 11 297 IPR023395 -
Glsi02g3383 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3383 Glsi-ChrGlsi02 81377604 81393811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3383 1 315 Chloroplast and Mitochondria Gene Families AT2G47490 78.095 6.65e-171 474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3383 02 81377604 81393811 Glsi02g3383 02 81377604 81393811 ECH