Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3382 ATGTGCAAGAGCTGGTTTTTCATAAAGTTGGTGGATGAGGATAGGCTGAGTGTCGCAAGGAACAGTAAAAACGGGGCGAGGGGTGACCTAAAATTAAAGCAGATCACTCTTGTTATGGCAGCAGAGAGGACATTGTCATTTTCAGTGGCATCGGTAGTGGAGGATGTGCTTCAACAGCATGGGAATCAGCTCAAAGATCTTGATTTGGAATCCAGAAAGGCAGAAGAAGCCGCATCAAGAAGATATGAAGCAGCAGGGTGGCTGAGAAAAATGGTCGGAGTCGTTGCAGCTAAAGATTTACCAGCTGAGCCCTCTGAGGAAGAGTTTAGGCTCGGTTTGAGAAGTGGGATTATCCTCTGCAATGTTATTAATAAGGTTCAACCCGGAGCTGTACCCAAGGTTGTGGAAAGTCCTATTGATTCTGCATTGATCCCAGATGGGGCACCATTATCGGCATTTCAGTATTTTGAAAACGTGAGGAACTTTCTCGTTGCTGTTCAGGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCAAGGATTGTGAACAACGTTTTGGCGCTTAAATCCTATAGTGATTGGAAACAGACCGGGACAAATAGTGCGTGGAAATTTGGTGGAACTCTGAAACCCACAGCCACTGGAAAATCTTTTGTCAGAAAAAACTCAGAGCCATTTACTAATTCCCTGTCAAGGAACTCATCCATCAATGAAAAATCTCTGCCAGCTCCTATCTCTGACGTTGAGTCTAATAAAATGTCGGTTTCTCATTCTTTGAGTAATCTCGTCCGTGCAATGCTATCGGATAAGAAGCCCGAAGAAGTTCCAATGTTGGTTGAATCCGTTTTGAATAAGGTAGTAGAGGAGTTTGAGCATCGCATTGCAAGCCAAGGTGAACAGACAAAAGCAACTTCAAGAGACGCTGTTTCTCAAGGCAATTCGTCTGTATCAAAGCTTGCTTTGGGCGATAAGAAGGCGGAGAACAAAACTCCTATGCTAACAAAGAAAGAGGCATTTATTCATAAAAACAGTCTCACTGATGAGGAATTGCAAAGCCAACTTCTAAAACAGCAAATGCACTTTGATCAACAGCAAAGAGAAATTCAAGAACTAAAGCGTACTCTTCACACCACAAAAACCGGTATGCAGTTCATGCAAATGACATTTCACGAGGAATTCTCGAATCTTGGCATACACATTCATGGCTTAGCTCATGCCGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTGTACAATCAAGTGCAGGATCTTAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCCTTCTTACCTGGAAAATCAAACTATTTGAGCACAGTGGAAAACATAGAAGATGGAACTATCACAATTAATGTCCCATCAAAGAATGGGAAAGGACGCAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGTAACCCAAGCGGAGGTCTTCTCTGATATGCAGCCTCTCATTAGATCTGTTCTTGATGGGTATAATGTTTGCATATTTGCATATGGTCAAACAGGATCAGGAAAAACTTACACTATGGCTGGACCAAAAGATATTACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAGGGGACTTGTTTCTTATAGCAGATCAGAGAAAGGACACATTTCGCTATGATGTGTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGAGATCTACTAGTTACTGATGGAACCAACAGAAGATATCCTTTTACCAGTCATTTAGTTCTTTTCCAGTCTTGAGGACAGGCCAAGACACTAATGTTCGTCCATGTAAGCCCAGAGACTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGACCTTGGTGCTGCTCGAGTAAACAAAGATAATGCAGATGTTAAAGAGCTTAAAGAACAGATTGCTAGCCTCAAGGCCGCATTGGCAAGAAAAGAGGGGGAGTCAGAACGCATGCAACATTCCTTATCTGGCAGCTCTGAAAAATACAGGAAAAGGGCTAGTGAGCTATCACCTTATCACACTGACAAGCGAAGTGCCGATACAGCGGGTGATCACCTTGGATATCGGCAACCGATGGTTGATGTTGGCAACATAGAGCTTGTCAGTAATACCAAGTTGAGACAAAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCGTGGCCCCCAGTGAGTAGTCCTGGACAAAACTATGGGGAAGATGATAAAGAAGCTGCCTCGGGAGAGTGGGTTGATAAGGTTATGGTAAACAAGCAAGATATAAGCAAAACTGAGAACCCCATAGAGTGTTGGGAAGCAGACAATGGGCACTTGTCTGAGGTCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATATACACAGAACAATCCTATAATATGTTGATGGGAGGCAACCAGTTCAACATTGCAGGTTCAGATGACATGGATGATCTTGATGCTGCAACTAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATAATTCCAAACTTACCGGCGTAGCCAATGGAATCGGATCAAAGACTATGAGATCTGTCTCAAAGTCAGCGAAAAGCCCAGAATTGAGCAATATCATCAATTCTTCTCTTGGTCCTTCACCTTCCCGGAAACAATCAAATGGTGTCTCACATCGAACAGGAAGGCATCCAGCTCCAGTTGACACGAAACGTAAAACTGGGAATAGAAAGTAA 2778 0.4222 MCKSWFFIKLVDEDRLSVARNSKNGARGDLKLKQITLVMAAERTLSFSVASVVEDVLQQHGNQLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPIDSALIPDGAPLSAFQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSARIVNNVLALKSYSDWKQTGTNSAWKFGGTLKPTATGKSFVRKNSEPFTNSLSRNSSINEKSLPAPISDVESNKMSVSHSLSNLVRAMLSDKKPEEVPMLVESVLNKVVEEFEHRIASQGEQTKATSRDAVSQGNSSVSKLALGDKKAENKTPMLTKKEAFIHKNSLTDEELQSQLLKQQMHFDQQQREIQELKRTLHTTKTGMQFMQMTFHEEFSNLGIHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGKSNYLSTVENIEDGTITINVPSKNGKGRRSFNFNKVFGPSVTQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMAGPKDITEKSQGVNYRALGDLFLIADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNRRYPFTSHLVLFQSXGQAKTLMFVHVSPETDAIGETISTLKFAERVATVDLGAARVNKDNADVKELKEQIASLKAALARKEGESERMQHSLSGSSEKYRKRASELSPYHTDKRSADTAGDHLGYRQPMVDVGNIELVSNTKLRQKTQSFDFDEISANSPPWPPVSSPGQNYGEDDKEAASGEWVDKVMVNKQDISKTENPIECWEADNGHLSEVFYQKYLQDSSKIYTEQSYNMLMGGNQFNIAGSDDMDDLDAATSDSSEPDLLWQFNNSKLTGVANGIGSKTMRSVSKSAKSPELSNIINSSLGPSPSRKQSNGVSHRTGRHPAPVDTKRKTGNRK 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3382 925 CDD CH_AtKIN14-like 80 197 - -
Glsi02g3382 925 Gene3D Kinesin motor domain 595 678 IPR036961 -
Glsi02g3382 925 Gene3D Kinesin motor domain 378 594 IPR036961 -
Glsi02g3382 925 MobiDBLite consensus disorder prediction 668 711 - -
Glsi02g3382 925 MobiDBLite consensus disorder prediction 668 706 - -
Glsi02g3382 925 SUPERFAMILY Calponin-homology domain, CH-domain 76 209 IPR036872 -
Glsi02g3382 925 Coils Coil 643 670 - -
Glsi02g3382 925 Coils Coil 57 77 - -
Glsi02g3382 925 ProSiteProfiles Kinesin motor domain profile. 437 589 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g3382 925 Pfam Calponin homology (CH) domain 79 198 IPR001715 GO:0005515
Glsi02g3382 925 ProSiteProfiles Calponin homology (CH) domain profile. 78 200 IPR001715 GO:0005515
Glsi02g3382 925 SMART kinesin_4 435 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g3382 925 PANTHER KINESIN-LIKE PROTEIN KLP-3 602 797 IPR027640 GO:0003777|GO:0007018
Glsi02g3382 925 SMART ch_5 80 198 IPR001715 GO:0005515
Glsi02g3382 925 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 379 590 - -
Glsi02g3382 925 Coils Coil 361 381 - -
Glsi02g3382 925 MobiDBLite consensus disorder prediction 873 907 - -
Glsi02g3382 925 Gene3D - 70 200 IPR036872 -
Glsi02g3382 925 MobiDBLite consensus disorder prediction 739 765 - -
Glsi02g3382 925 FunFam Kinesin-like protein KIN-14I isoform A 65 217 - -
Glsi02g3382 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 672 IPR027417 -
Glsi02g3382 925 MobiDBLite consensus disorder prediction 873 925 - -
Glsi02g3382 925 Pfam Microtubule binding 423 581 IPR031852 GO:0008017
Glsi02g3382 925 MobiDBLite consensus disorder prediction 911 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3382 Glsi-ChrGlsi02 81365843 81372928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3382 425 588 Calmodulin-binding Proteins AT5G65930 37.870 1.25e-28 122